Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C21
(1008 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.15
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.59
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.2
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 2e-04
Identities = 48/185 (25%), Positives = 49/185 (26%), Gaps = 7/185 (3%)
Frame = +1
Query: 232 PXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXP---PXXPPXPVSPPPXXXFXFPGX 402
P P G PP G P PP P P +PPP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP-----PPR 367
Query: 403 GGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXX-GGPXXXPGGGGGX---PPXPXGG 570
G P P PP PPP P P G PP P
Sbjct: 368 SAPSTGRQP------PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP- 420
Query: 571 GSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXPPXXXXPPXGXLFXPXAXPPPPPGGXPX 750
PP P PP P A P PP P P A P PP P
Sbjct: 421 -PSLPPSAPPSLPPSAPPSL--PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 751 XRPPP 765
P P
Sbjct: 478 PAPAP 482
Score = 38.3 bits (85), Expect = 0.002
Identities = 39/163 (23%), Positives = 41/163 (25%)
Frame = +1
Query: 199 PPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPXPVSPPPX 378
PPPP PP G PPP P P P + P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 379 XXFXFPGXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXPGGGGGXPPX 558
P G +P V P PP PP P P G PP
Sbjct: 399 SAPALPPLGNASRTSTPP--VPTPPS-------LPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 559 PXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXPPXXXXP 687
P P P P G P P A P P P
Sbjct: 450 P--------PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 37.9 bits (84), Expect = 0.002
Identities = 48/209 (22%), Positives = 50/209 (23%), Gaps = 15/209 (7%)
Frame = +1
Query: 181 PXARGXPP-PPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPX 357
P + PP PP P P PP P PP P P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 358 ------PVSPPPXXXFXFPGXGGGGXGXSPXXXVXX------PXGGGXXLFGXPPGPPPX 501
P PPP P P G G PP PPP
Sbjct: 284 INSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPP-PPPP 342
Query: 502 --XXXGGPXXXPGGGGGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXPPX 675
G P G PP P + P P P P P
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP--PLSSSRAVSNPPAPPPAIPGRSA 400
Query: 676 XXXPPXGXLFXPXAXPPPPPGGXPXXRPP 762
PP G P P P P PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 35.5 bits (78), Expect = 0.012
Identities = 47/189 (24%), Positives = 48/189 (25%), Gaps = 1/189 (0%)
Frame = +1
Query: 199 PPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXG-PXXPPGPFXPPXXPPXPVSPPP 375
PPPP G P PPP P P G PP PP P S P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP--PPPPRSAPS 371
Query: 376 XXXFXFPGXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXPGGGGGXPP 555
P P P L PP P P P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL---PPLGNASRTSTPPVPTPPSL--PPS 426
Query: 556 XPXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXPPXXXXPPXGXLFXPXAXPPPPP 735
P PP P G P P P + PP P P A P PPP
Sbjct: 427 APPSLPPSAPPSLPMGAP-------AAPPLPPSAPIAPPLPAGMPAAPPL-PPAAPAPPP 478
Query: 736 GGXPXXRPP 762
P P
Sbjct: 479 APAPAPAAP 487
Score = 33.1 bits (72), Expect = 0.064
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +3
Query: 480 PPRXPPPXGXGGAXXFXGGGGGXPPXPXGGGLXXPPXGPXGGAPPXGXXXSGPXXPPGPX 659
PP PP G PP P + P APP P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 660 PXXP 671
P P
Sbjct: 484 PAAP 487
Score = 31.5 bits (68), Expect = 0.19
Identities = 24/99 (24%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Frame = +1
Query: 481 PPGPPPXXXXGGPXXXPGGGGGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXX-PXAR 657
PP PP P P PP +G P P + P ++
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 658 RPXPPXXXXPPXGXLFXPXAXPPPPPGGXPXXRPPPXXG 774
P PP L PPPPP R P G
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIG 328
Score = 23.4 bits (48), Expect(2) = 7.1
Identities = 10/32 (31%), Positives = 11/32 (34%)
Frame = -2
Query: 488 PGGXPKXKXPPPXGXXTXXXGEXPXPPPPXPG 393
P P PP + P PPP PG
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 21.0 bits (42), Expect(2) = 7.1
Identities = 14/51 (27%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Frame = -2
Query: 716 AXGXKRXPXGGXXXXGGXGRRAXGXXGPRXXXPPXGGPP-XGXXGGXPEPP 567
A KR P G+ G PP PP G P PP
Sbjct: 305 AANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.1 bits (87), Expect = 0.001
Identities = 36/150 (24%), Positives = 39/150 (26%), Gaps = 3/150 (2%)
Frame = +1
Query: 319 PPGPFXPPXXPPXPV---SPPPXXXFXFPGXGGGGXGXSPXXXVXXPXGGGXXLFGXPPG 489
PP P PP PV +PP P G P G
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 490 PPPXXXXGGPXXXPGGGGGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXP 669
PP G P PP P + P P G PP P A P P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV-------PKPSVAAPPVP 1134
Query: 670 PXXXXPPXGXLFXPXAXPPPPPGGXPXXRP 759
PP P P G P +P
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 39.1 bits (87), Expect = 0.001
Identities = 53/204 (25%), Positives = 56/204 (27%), Gaps = 9/204 (4%)
Frame = +1
Query: 181 PXARGXPPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPXP 360
P PP P GAP PP P P P PP P
Sbjct: 1044 PIPTSTPPVPKSSS-GAPSAPPPVPAPSSEIPSIPAPS---GAPPVPAPSGIPPVPKPSV 1099
Query: 361 VSPP-PXXXFXFPGXGG-GGXGXSPXXXVXXPXGGGXXLFGXPPGP------PPXXXXGG 516
+PP P P G P V P G PP P PP G
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPS--GAPPVPKPSVAAPPVPAPSG 1157
Query: 517 PXXXPGGGGGXPPXPXGGGSGXPPXX-PXGGPPXGGXIXRGPXXPXARRPXPPXXXXPPX 693
P PP P SG PP P G P P P PP
Sbjct: 1158 APPVPKPSVAAPPVP-APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 694 GXLFXPXAXPPPPPGGXPXXRPPP 765
+ P A PP P P + PP
Sbjct: 1217 PPVPTPSAGLPPVP--VPTAKAPP 1238
Score = 35.9 bits (79), Expect = 0.009
Identities = 47/201 (23%), Positives = 49/201 (24%), Gaps = 3/201 (1%)
Frame = +1
Query: 181 PXARGXPPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPXP 360
P PP P P G PPP P P PP P
Sbjct: 1035 PVPSTAPPVPIPTST-PPVPKSSSGAPSAPPPVPAPSSEI---PSIPAPSGAPPVPAPSG 1090
Query: 361 VSPPPXXXFXFPGXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXPGGG 540
+ P P P P V P G PP G P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPP---VPAPSGAPPVPKPSVAAPPVPVPSGAPPV-PKPS 1146
Query: 541 GGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARR---PXPPXXXXPPXGXLFXP 711
PP P G+ P PP P P P PP PP
Sbjct: 1147 VAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK--PS 1204
Query: 712 XAXPPPPPGGXPXXRPPPXXG 774
PP PP P P G
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSAG 1225
Score = 34.3 bits (75), Expect = 0.028
Identities = 42/188 (22%), Positives = 48/188 (25%), Gaps = 3/188 (1%)
Frame = +1
Query: 181 PXARGXPPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFX---PPXXP 351
P G PP P P P P P G PP P PP
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS-GAPPVPKPSVAAPPVPVPSGAPPVPK 1144
Query: 352 PXPVSPPPXXXFXFPGXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXP 531
P +PP P P V P G + G PP P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPP---VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 532 GGGGGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXPPXXXXPPXGXLFXP 711
G PP P + P G PP + P P P P + P
Sbjct: 1202 KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP--SVSTPRSSVPSP 1259
Query: 712 XAXPPPPP 735
+ P P
Sbjct: 1260 HSNASPSP 1267
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.007
Identities = 29/76 (38%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = -2
Query: 410 PPPXPGXXXXXXGGGETGX--GGXXGGXKGPGG-XXGPXKXHXXPPXXGGGXPXPPXGGX 240
PPP PG G G G GG G GPGG GP P GGG GG
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG--FGGG 257
Query: 239 XXGAPXXPPXGGGGXP 192
G P GG G P
Sbjct: 258 PGGFGGGP--GGHGGP 271
Score = 32.3 bits (70), Expect = 0.11
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +3
Query: 453 GGGXFXFWXPPRXPPPXGXGGAXXFXGGGGGXPPXPXGGGLXXPPXGPXGGAPPXGXXXS 632
GGG F PPP G GG F G GG GG P G GG G
Sbjct: 187 GGGFGGFGGGSGGPPP-GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 633 G 635
G
Sbjct: 246 G 246
Score = 29.9 bits (64), Expect = 0.59
Identities = 27/80 (33%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Frame = +1
Query: 397 GXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXPGGGGGXPPXPXG--- 567
G GGG G P GG G G GGP GG GG P G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGH-GGFGGGPGGFEGGPGGFGGGPGGFGG 249
Query: 568 --GGSGXPPXXPXGGPPXGG 621
GG G P GGP G
Sbjct: 250 GLGGFGGGPGGFGGGPGGHG 269
Score = 29.5 bits (63), Expect = 0.78
Identities = 32/122 (26%), Positives = 32/122 (26%)
Frame = -2
Query: 686 GXXXXGGXGRRAXGXXGPRXXXPPXGGPPXGXXGGXPEPPPXXXXXXXXXXXXXXXXXPX 507
G GG A G G G G P P P
Sbjct: 164 GGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGH 223
Query: 506 XXXGGGPGGXPKXKXPPPXGXXTXXXGEXPXPPPPXPGXXXXXXGGGETGXGGXXGGXKG 327
GGGPGG P G G G GGG G GG GG G
Sbjct: 224 GGFGGGPGGFEGG----PGGFGGGPGGF---------GGGLGGFGGGPGGFGGGPGGHGG 270
Query: 326 PG 321
PG
Sbjct: 271 PG 272
Score = 29.1 bits (62), Expect = 1.0
Identities = 22/59 (37%), Positives = 22/59 (37%)
Frame = -2
Query: 374 GGGETGXGGXXGGXKGPGGXXGPXKXHXXPPXXGGGXPXPPXGGXXXGAPXXPPXGGGG 198
GGG G GG G GG G H GGG P GG G P GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG-PGGFEGG-PGGFGGGPGGFGGG 250
Score = 27.5 bits (58), Expect = 3.2
Identities = 26/81 (32%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +1
Query: 253 GGXGXPPPXXG--GXXWXFXGPXXPPGPFXPPXXPPXPVSPPPXXXFXFPGXGGGGXGXS 426
GG G PPP G G F G G P P PG GGG G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG- 253
Query: 427 PXXXVXXPXGGGXXLFGXPPG 489
GGG FG PG
Sbjct: 254 --------FGGGPGGFGGGPG 266
Score = 27.1 bits (57), Expect = 4.2
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = +1
Query: 403 GGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXPGGGGGXPPXPXGGG 573
G GG G P P G FG PG GG PGG GG P G G
Sbjct: 222 GHGGFGGGPGGFEGGPGG-----FGGGPGGF-GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.1 bits (57), Expect = 4.2
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = +1
Query: 397 GXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPPPXXXXGGPXXXPGGGGG 546
G G GG P P G G L G GP GG PGG GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP------GGFGGGPGGHGG 270
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 764 GGGRXXGXPPGGGGGXAXGXKRXPXGGXXXXGGXG 660
GG G PGG GG G P G GG G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 735 GGGGGXXXXGKKGAXGXPXXXRGXXAXGXGGPG 637
GGG G G G G P G GGPG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = +1
Query: 661 PXPPXXXXPPXGXLFXPXAXPPPPPG----GXPXXRPPP 765
P P PP + PPPPPG G P PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 549 PPXPXGGGLXXPPXGPXGGAPPXGXXXSGPXXPPGPXP 662
PP P GG PP PP G +GP PP P P
Sbjct: 753 PPAPIMGGPPPPP-------PPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.34
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = +1
Query: 469 LFGXPPGPPPXXXXGGPXXXPGGGGGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXXP 648
L PP PPP P P PP P GG PP P G GP P
Sbjct: 728 LLKSPPPPPPAVIV--PTPAPAPIPVPPPAPIMGGPPPPPPPP-------GVAGAGPPPP 778
Query: 649 XARRPXPPXXXXPPXGXLFXPXAXPPPPP 735
P PP + P P P
Sbjct: 779 ----PPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 30.3 bits (65), Expect = 0.45
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +1
Query: 199 PPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPXPVSPPP 375
PPPP P P P P GG P PP P PP P PPP
Sbjct: 732 PPPPPPAVI-VPTPAPAPIPVPPPAPIMGGP------PPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.78
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 661 PXPPXXXXPPXGXLFXPXAXPPPPPGGXPXXRPPPXXGXXG 783
P PP P P P P GG P PPP G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG 774
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 322 PGPFXPPXXPPXPVSPPPXXXFXFPGXGGGGXGXSPXXXVXXPXGGGXXLFGXPPGPP 495
P P P PP P+ P PG G G P GG P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 635 PRXXXPPXGGPPXGXXGGXPEPPP 564
P PP PP G G P PPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 488 PGGXPKXKXPPPXGXXTXXXGEXPXPPPPXP 396
P P PPP G P PPPP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 461 PPPXGXXTXXXGEXPXPPPPXP 396
PPP P PPPP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 23.0 bits (47), Expect(2) = 1.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 605 PPXGXXGGXPEPPP 564
PP GG P PPP
Sbjct: 753 PPAPIMGGPPPPPP 766
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +1
Query: 577 GXPPXXPXGGPPXGGXIXRGPXXPXARRPXPPXXXXPPXGXLFXPXAXPPPPPGGXPXXR 756
G P P PP P P PP PP P A PP P G P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP------PSA--PPMPAGPPSAP 1731
Query: 757 PPP 765
PPP
Sbjct: 1732 PPP 1734
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 244 PPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPXPVSPPPXXXFXFPG 399
PP PPP P PP P PP PP P+ PG
Sbjct: 1699 PPQMSAPTPPPPPMSVP---PPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -2
Query: 476 PKXKXPPPXGXXTXXXGEXPXPPPPXP 396
P PPP G PPPP P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.59
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 721 PPPPPGGXPXXRPPP 765
PPPPPG P +PPP
Sbjct: 12 PPPPPGFEPPSQPPP 26
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 310 PXXPPGPFXPPXXPPXPVSPPP 375
P PP F PP PP P PPP
Sbjct: 11 PPPPPPGFEPPSQPPPP--PPP 30
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 661 PXPPXXXXPPXGXLFXPXAXPPPPPGG 741
P P PP G P PPPPP G
Sbjct: 6 PGNPPPPPPPPG-FEPPSQPPPPPPPG 31
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +1
Query: 181 PXARGXPPPPXGGXXGAPXXXPPXGGXGXPPPXXGGXXWXFXGPXXPPGPFXPPXXPPXP 360
P PPP P PP PPP P P P P PP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPS-SLPPPAQPAAP--VKSP--PSAPSLPSAVPPMP 198
Query: 361 --VSPPP 375
V PPP
Sbjct: 199 PKVPPPP 205
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/80 (22%), Positives = 21/80 (26%)
Frame = +1
Query: 490 PPPXXXXGGPXXXPGGGGGXPPXPXGGGSGXPPXXPXGGPPXGGXIXRGPXXPXARRPXP 669
P P P P PP P P P PP + + P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 670 PXXXXPPXGXLFXPXAXPPP 729
P P P + PP
Sbjct: 205 PLSQAPVANTSSRPSSFAPP 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.160 0.585
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,191,596
Number of Sequences: 5004
Number of extensions: 43196
Number of successful extensions: 293
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 523262732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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