Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C18
(900 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 138 7e-33
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 138 7e-33
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 138 7e-33
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 138 7e-33
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 138 7e-33
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 138 7e-33
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 123 3e-28
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 123 3e-28
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 138 bits (335), Expect = 7e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 218 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 397
YDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+L
Sbjct: 48 YDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQAL 107
Query: 398 EALKLVEKVQDGGRILTTQGRRDLDRI 478
E +LVEK DGGR L++ G+RDLDRI
Sbjct: 108 EHARLVEKHPDGGRKLSSIGQRDLDRI 134
Score = 70.1 bits (164), Expect = 4e-12
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 225
M VTVKD++Q + K VA LKKTGK+KVP+ MD++KTA+FKELAP P
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDP 50
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 138 bits (335), Expect = 7e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 218 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 397
YDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+L
Sbjct: 48 YDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQAL 107
Query: 398 EALKLVEKVQDGGRILTTQGRRDLDRI 478
E +LVEK DGGR L++ G+RDLDRI
Sbjct: 108 EHARLVEKHPDGGRKLSSIGQRDLDRI 134
Score = 70.5 bits (165), Expect = 3e-12
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 225
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 138 bits (335), Expect = 7e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 218 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 397
YDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+L
Sbjct: 48 YDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQAL 107
Query: 398 EALKLVEKVQDGGRILTTQGRRDLDRI 478
E +LVEK DGGR L++ G+RDLDRI
Sbjct: 108 EHARLVEKHPDGGRKLSSIGQRDLDRI 134
Score = 70.5 bits (165), Expect = 3e-12
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 225
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 138 bits (335), Expect = 7e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 218 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 397
YDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+L
Sbjct: 48 YDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQAL 107
Query: 398 EALKLVEKVQDGGRILTTQGRRDLDRI 478
E +LVEK DGGR L++ G+RDLDRI
Sbjct: 108 EHARLVEKHPDGGRKLSSIGQRDLDRI 134
Score = 70.5 bits (165), Expect = 3e-12
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 225
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 138 bits (335), Expect = 7e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 218 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 397
YDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+L
Sbjct: 48 YDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQAL 107
Query: 398 EALKLVEKVQDGGRILTTQGRRDLDRI 478
E +LVEK DGGR L++ G+RDLDRI
Sbjct: 108 EHARLVEKHPDGGRKLSSIGQRDLDRI 134
Score = 70.5 bits (165), Expect = 3e-12
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 225
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 138 bits (335), Expect = 7e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 218 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 397
YDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++ ARKALQ+L
Sbjct: 48 YDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQAL 107
Query: 398 EALKLVEKVQDGGRILTTQGRRDLDRI 478
E +LVEK DGGR L++ G+RDLDRI
Sbjct: 108 EHARLVEKHPDGGRKLSSIGQRDLDRI 134
Score = 70.5 bits (165), Expect = 3e-12
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 225
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 123 bits (297), Expect = 3e-28
Identities = 55/86 (63%), Positives = 66/86 (76%)
Frame = +2
Query: 221 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 400
D DWFY RCA+I+RH+Y+RSP GV TK++ GRKRNGV PS CRSS RKALQ+LE
Sbjct: 49 DDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALE 108
Query: 401 ALKLVEKVQDGGRILTTQGRRDLDRI 478
A +VE+ DGGR LT QG+R+LDRI
Sbjct: 109 AANMVERHPDGGRKLTPQGQRNLDRI 134
Score = 52.8 bits (121), Expect = 6e-07
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 216
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAP 47
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 123 bits (297), Expect = 3e-28
Identities = 55/86 (63%), Positives = 66/86 (76%)
Frame = +2
Query: 221 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 400
D DWFY RCA+I+RH+Y+RSP GV TK++ GRKRNGV PS CRSS RKALQ+LE
Sbjct: 49 DDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALE 108
Query: 401 ALKLVEKVQDGGRILTTQGRRDLDRI 478
A +VE+ DGGR LT QG+R+LDRI
Sbjct: 109 AANMVERHPDGGRKLTPQGQRNLDRI 134
Score = 52.8 bits (121), Expect = 6e-07
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +1
Query: 76 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 216
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAP 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,981,677
Number of Sequences: 53049
Number of extensions: 620745
Number of successful extensions: 1300
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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