Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C17
(940 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058729-1|AAL13958.1| 439|Drosophila melanogaster LD47530p pro... 93 5e-19
AE014134-1709|AAF52818.1| 439|Drosophila melanogaster CG4535-PA... 93 5e-19
AF163664-1|AAF18387.1| 439|Drosophila melanogaster FK506-bindin... 92 9e-19
Z49079-1|CAA88904.1| 108|Drosophila melanogaster FK506-binding ... 60 3e-09
U41441-1|AAA91178.1| 108|Drosophila melanogaster macrolide bind... 60 3e-09
AY071106-1|AAL48728.1| 166|Drosophila melanogaster RE16407p pro... 60 4e-09
AE013599-2852|AAF57582.1| 108|Drosophila melanogaster CG11001-P... 60 4e-09
Z46894-1|CAA86996.1| 357|Drosophila melanogaster FKBP39 protein. 55 2e-07
AY094814-1|AAM11167.1| 357|Drosophila melanogaster LD30817p pro... 55 2e-07
AE014297-2012|AAF55171.2| 357|Drosophila melanogaster CG6226-PA... 55 2e-07
AY095183-1|AAM12276.1| 138|Drosophila melanogaster GM09283p pro... 50 3e-06
AY075550-1|AAL68357.1| 138|Drosophila melanogaster RH50927p pro... 50 3e-06
AE014297-1351|AAF54674.1| 138|Drosophila melanogaster CG14715-P... 50 3e-06
BT012468-1|AAS93739.1| 231|Drosophila melanogaster RE40519p pro... 50 5e-06
AF132555-1|AAD27854.2| 256|Drosophila melanogaster GM07659p pro... 50 5e-06
AF132154-1|AAD34742.1| 216|Drosophila melanogaster unknown prot... 50 5e-06
AE013599-3205|AAF46726.1| 216|Drosophila melanogaster CG9847-PA... 50 5e-06
AE013599-3204|AAM70900.1| 231|Drosophila melanogaster CG9847-PB... 50 5e-06
AY058659-1|AAL13888.1| 397|Drosophila melanogaster LD36412p pro... 31 2.3
AE013599-2733|AAF57662.1| 397|Drosophila melanogaster CG5482-PA... 31 2.3
>AY058729-1|AAL13958.1| 439|Drosophila melanogaster LD47530p
protein.
Length = 439
Score = 93.1 bits (221), Expect = 5e-19
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RNEPFEF LGK VI+A+ +GV TMK GE C LTCAP YAY + + PP+ATL FE
Sbjct: 55 RNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGA-AGSPPAIPPDATLIFE 113
Query: 566 IEMIDWRLEDLSP 604
+EM+ W+ EDLSP
Sbjct: 114 LEMLGWKGEDLSP 126
Score = 52.4 bits (120), Expect = 9e-07
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 274 ELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
E+ +G G ETP+ GC VS+HY G L+DGT+FDSS + G+
Sbjct: 18 EILKEGTGTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGK 65
Score = 37.5 bits (83), Expect = 0.026
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 386 RNEPFEFCLGKD-GVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHF 562
R+ F++ GK G+I+ +I + M GE + +YA+ ++ PPNAT+ +
Sbjct: 168 RDVEFDYGEGKAIGIIDGVEIALEKMNVGETSRIKIQAKYAFGAKGNEEFKIPPNATVEY 227
Query: 563 EIEMID 580
++++D
Sbjct: 228 TVKLVD 233
>AE014134-1709|AAF52818.1| 439|Drosophila melanogaster CG4535-PA
protein.
Length = 439
Score = 93.1 bits (221), Expect = 5e-19
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RNEPFEF LGK VI+A+ +GV TMK GE C LTCAP YAY + + PP+ATL FE
Sbjct: 55 RNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGA-AGSPPAIPPDATLIFE 113
Query: 566 IEMIDWRLEDLSP 604
+EM+ W+ EDLSP
Sbjct: 114 LEMLGWKGEDLSP 126
Score = 52.4 bits (120), Expect = 9e-07
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 274 ELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
E+ +G G ETP+ GC VS+HY G L+DGT+FDSS + G+
Sbjct: 18 EILKEGTGTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGK 65
Score = 37.5 bits (83), Expect = 0.026
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 386 RNEPFEFCLGKD-GVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHF 562
R+ F++ GK G+I+ +I + M GE + +YA+ ++ PPNAT+ +
Sbjct: 168 RDVEFDYGEGKAIGIIDGVEIALEKMNVGETSRIKIQAKYAFGAKGNEEFKIPPNATVEY 227
Query: 563 EIEMID 580
++++D
Sbjct: 228 TVKLVD 233
>AF163664-1|AAF18387.1| 439|Drosophila melanogaster FK506-binding
protein FKBP59 protein.
Length = 439
Score = 92.3 bits (219), Expect = 9e-19
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RNEPFEF LGK VI+A+ +GV TMK GE C LTCAP YAY + + PP+ATL FE
Sbjct: 55 RNEPFEFSLGKGEVIKAFDMGVATMKLGERCFLTCAPNYAYGA-AGSPPAIPPDATLIFE 113
Query: 566 IEMIDWRLEDLSP 604
+EM+ W+ EDLSP
Sbjct: 114 LEMLGWKGEDLSP 126
Score = 52.4 bits (120), Expect = 9e-07
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 274 ELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
E+ +G G ETP+ GC VS+HY G L+DGT+FDSS + G+
Sbjct: 18 EILKEGTGTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGK 65
Score = 37.9 bits (84), Expect = 0.020
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 386 RNEPFEFCLGKD-GVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHF 562
R+ F++ GK GVI+ +I + M GE + +YA+ ++ PPNAT+ +
Sbjct: 168 RDVEFDYGEGKAIGVIDGVEIALEKMNVGETSRIKIQAKYAFGAKGNEEFKIPPNATVEY 227
Query: 563 EIEMID 580
++++D
Sbjct: 228 TVKLVD 233
>Z49079-1|CAA88904.1| 108|Drosophila melanogaster FK506-binding
protein protein.
Length = 108
Score = 60.5 bits (140), Expect = 3e-09
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN+PF+F +GK VI W GV + G+ L C+P+YAY S+ PPN+TL F+
Sbjct: 43 RNKPFKFTIGKGEVIRGWDEGVAQLSVGQSAKLICSPDYAYGSR-GHPGVIPPNSTLTFD 101
Query: 566 IEMI 577
+E++
Sbjct: 102 VELL 105
Score = 50.0 bits (114), Expect = 5e-06
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 283 AQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
A G+G+ P G V+VHY GTL DGTKFDSSR + + + G+
Sbjct: 9 APGDGSTYPKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGK 53
>U41441-1|AAA91178.1| 108|Drosophila melanogaster macrolide binding
protein protein.
Length = 108
Score = 60.5 bits (140), Expect = 3e-09
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN+PF+F +GK VI W GV + G+ L C+P+YAY S+ PPN+TL F+
Sbjct: 43 RNKPFKFTIGKGEVIRGWDEGVAQLSVGQSAKLICSPDYAYGSR-GHPGVIPPNSTLTFD 101
Query: 566 IEMI 577
+E++
Sbjct: 102 VELL 105
Score = 50.0 bits (114), Expect = 5e-06
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 283 AQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
A G+G+ P G V+VHY GTL DGTKFDSSR + + + G+
Sbjct: 9 APGDGSTYPKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGK 53
>AY071106-1|AAL48728.1| 166|Drosophila melanogaster RE16407p
protein.
Length = 166
Score = 60.1 bits (139), Expect = 4e-09
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN+PF+F +GK VI W GV + G+ L C+P+YAY S+ PPN+TL F+
Sbjct: 43 RNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSR-GHPGVIPPNSTLTFD 101
Query: 566 IEMI 577
+E++
Sbjct: 102 VELL 105
Score = 50.0 bits (114), Expect = 5e-06
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 283 AQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
A G+G+ P G V+VHY GTL DGTKFDSSR + + + G+
Sbjct: 9 APGDGSTYPKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGK 53
>AE013599-2852|AAF57582.1| 108|Drosophila melanogaster CG11001-PA
protein.
Length = 108
Score = 60.1 bits (139), Expect = 4e-09
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN+PF+F +GK VI W GV + G+ L C+P+YAY S+ PPN+TL F+
Sbjct: 43 RNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSR-GHPGVIPPNSTLTFD 101
Query: 566 IEMI 577
+E++
Sbjct: 102 VELL 105
Score = 50.0 bits (114), Expect = 5e-06
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 283 AQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
A G+G+ P G V+VHY GTL DGTKFDSSR + + + G+
Sbjct: 9 APGDGSTYPKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGK 53
>Z46894-1|CAA86996.1| 357|Drosophila melanogaster FKBP39 protein.
Length = 357
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
+ +PF+F LG VI+ W +GV MK G ++TC P AY ++ A PN+TL FE
Sbjct: 292 KGKPFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGAR-GAPPKIGPNSTLVFE 350
Query: 566 IEM 574
+E+
Sbjct: 351 VEL 353
>AY094814-1|AAM11167.1| 357|Drosophila melanogaster LD30817p
protein.
Length = 357
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
+ +PF+F LG VI+ W +GV MK G ++TC P AY ++ A PN+TL FE
Sbjct: 292 KGKPFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGAR-GAPPKIGPNSTLVFE 350
Query: 566 IEM 574
+E+
Sbjct: 351 VEL 353
>AE014297-2012|AAF55171.2| 357|Drosophila melanogaster CG6226-PA
protein.
Length = 357
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
+ +PF+F LG VI+ W +GV MK G ++TC P AY ++ A PN+TL FE
Sbjct: 292 KGKPFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGAR-GAPPKIGPNSTLVFE 350
Query: 566 IEM 574
+E+
Sbjct: 351 VEL 353
>AY095183-1|AAM12276.1| 138|Drosophila melanogaster GM09283p
protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R PF F LG VI+ W G+ M +GE LT PE Y + A PPNA L F+
Sbjct: 64 RGTPFSFTLGARQVIKGWDQGILGMCEGEQRKLTIPPELGYGASGAGGGKIPPNAVLVFD 123
Query: 566 IEMI 577
E++
Sbjct: 124 TELV 127
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 325 VSVHYVGTLLDGTKFDSSRXQKRTVRILFGQR 420
V VHY G L DGT+FDSS + G R
Sbjct: 44 VHVHYRGALQDGTEFDSSYSRGTPFSFTLGAR 75
>AY075550-1|AAL68357.1| 138|Drosophila melanogaster RH50927p
protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R PF F LG VI+ W G+ M +GE LT PE Y + A PPNA L F+
Sbjct: 64 RGTPFSFTLGARQVIKGWDQGILGMCEGEQRKLTIPPELGYGASGAGGGKIPPNAVLVFD 123
Query: 566 IEMI 577
E++
Sbjct: 124 TELV 127
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 325 VSVHYVGTLLDGTKFDSSRXQKRTVRILFGQR 420
V VHY G L DGT+FDSS + G R
Sbjct: 44 VHVHYRGALQDGTEFDSSYSRGTPFSFTLGAR 75
>AE014297-1351|AAF54674.1| 138|Drosophila melanogaster CG14715-PA
protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R PF F LG VI+ W G+ M +GE LT PE Y + A PPNA L F+
Sbjct: 64 RGTPFSFTLGARQVIKGWDQGILGMCEGEQRKLTIPPELGYGASGAGGGKIPPNAVLVFD 123
Query: 566 IEMI 577
E++
Sbjct: 124 TELV 127
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 325 VSVHYVGTLLDGTKFDSSRXQKRTVRILFGQR 420
V VHY G L DGT+FDSS + G R
Sbjct: 44 VHVHYRGALQDGTEFDSSYSRGTPFSFTLGAR 75
>BT012468-1|AAS93739.1| 231|Drosophila melanogaster RE40519p
protein.
Length = 231
Score = 50.0 bits (114), Expect = 5e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R++PF F LG VI+ W G+ M GE LT P+ Y Q A + PP ATL F+
Sbjct: 83 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVI-PPKATLLFD 141
Query: 566 IEMID 580
+E+I+
Sbjct: 142 VELIN 146
>AF132555-1|AAD27854.2| 256|Drosophila melanogaster GM07659p
protein.
Length = 256
Score = 50.0 bits (114), Expect = 5e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R++PF F LG VI+ W G+ M GE LT P+ Y Q A + PP ATL F+
Sbjct: 108 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVI-PPKATLLFD 166
Query: 566 IEMID 580
+E+I+
Sbjct: 167 VELIN 171
>AF132154-1|AAD34742.1| 216|Drosophila melanogaster unknown
protein.
Length = 216
Score = 50.0 bits (114), Expect = 5e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R++PF F LG VI+ W G+ M GE LT P+ Y Q A + PP ATL F+
Sbjct: 68 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVI-PPKATLLFD 126
Query: 566 IEMID 580
+E+I+
Sbjct: 127 VELIN 131
>AE013599-3205|AAF46726.1| 216|Drosophila melanogaster CG9847-PA,
isoform A protein.
Length = 216
Score = 50.0 bits (114), Expect = 5e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R++PF F LG VI+ W G+ M GE LT P+ Y Q A + PP ATL F+
Sbjct: 68 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVI-PPKATLLFD 126
Query: 566 IEMID 580
+E+I+
Sbjct: 127 VELIN 131
>AE013599-3204|AAM70900.1| 231|Drosophila melanogaster CG9847-PB,
isoform B protein.
Length = 231
Score = 50.0 bits (114), Expect = 5e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R++PF F LG VI+ W G+ M GE LT P+ Y Q A + PP ATL F+
Sbjct: 83 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVI-PPKATLLFD 141
Query: 566 IEMID 580
+E+I+
Sbjct: 142 VELIN 146
>AY058659-1|AAL13888.1| 397|Drosophila melanogaster LD36412p
protein.
Length = 397
Score = 31.1 bits (67), Expect = 2.3
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 398 FEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXS-----QVAAHXXSPPNATLHF 562
F+ +G VI+ + +P ++ GEV ++ + Y S + + PP+A L +
Sbjct: 108 FQCHVGDYEVIQGLDMVLPMLQVGEVSQVSVDSRFGYGSLGLKKEGESEYLVPPDAHLTY 167
Query: 563 EIEMIDWRLEDLS 601
EIE++D + E+ +
Sbjct: 168 EIELLDIKYEEFA 180
>AE013599-2733|AAF57662.1| 397|Drosophila melanogaster CG5482-PA
protein.
Length = 397
Score = 31.1 bits (67), Expect = 2.3
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 398 FEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXS-----QVAAHXXSPPNATLHF 562
F+ +G VI+ + +P ++ GEV ++ + Y S + + PP+A L +
Sbjct: 108 FQCHVGDYEVIQGLDMVLPMLQVGEVSQVSVDSRFGYGSLGLKKEGESEYLVPPDAHLTY 167
Query: 563 EIEMIDWRLEDLS 601
EIE++D + E+ +
Sbjct: 168 EIELLDIKYEEFA 180
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,331,499
Number of Sequences: 53049
Number of extensions: 710412
Number of successful extensions: 1337
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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