Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C17
(940 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 47 2e-05
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 47 2e-05
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 36 0.032
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 36 0.042
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 33 0.29
U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical pr... 32 0.51
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 29 6.3
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 29 6.3
AF040653-6|AAB95032.1| 508|Caenorhabditis elegans F-box b prote... 29 6.3
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 28 8.4
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 66.5 bits (155), Expect = 3e-11
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R + F F LG+ VI+ W +GV TM KGEV T +Y Y + P ATL FE
Sbjct: 56 RGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGY-GDAGSPPKIPGGATLIFE 114
Query: 566 IEMIDWRLEDLSP 604
+E+ +W ED+SP
Sbjct: 115 VELFEWSAEDISP 127
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +1
Query: 286 QGEGNETPNQGCHVSVHYVGTLLDGTKFDSSR 381
+G+G P G V VHYVGTL +GTKFDSSR
Sbjct: 23 EGQGVVKPTTGTTVKVHYVGTLENGTKFDSSR 54
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R PF+F +GK VI+ W GV M GE LT + + Y + P NATL FE
Sbjct: 43 RGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPR-GVPPQIPANATLVFE 101
Query: 566 IEMI 577
+E++
Sbjct: 102 VELL 105
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 274 ELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
++ +G+ P G V+ HYV TL +G K DSSR + + G+
Sbjct: 6 QILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGK 53
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
R PF+F +GK VI+ W GV M GE LT + + Y + P NATL FE
Sbjct: 43 RGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPR-GVPPQIPANATLVFE 101
Query: 566 IEMI 577
+E++
Sbjct: 102 VELL 105
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 274 ELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
++ +G+ P G V+ HYV TL +G K DSSR + + G+
Sbjct: 6 QILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGK 53
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RNE F F LG+ VI+ W G+ M GE ILT P Y + A P N+ L F+
Sbjct: 68 RNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGER-GAPPKIPGNSVLKFD 126
Query: 566 IEMI 577
+E++
Sbjct: 127 VELM 130
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 313 QGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
+G + +HY GTLLDGT+FDSSR + GQ
Sbjct: 44 KGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQ 78
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 36.3 bits (80), Expect = 0.032
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN PF F +G VI+ I + M +GE + PE AY + P N+ LHF+
Sbjct: 189 RNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAY-GENGRPPAIPGNSYLHFD 247
Query: 566 IEM 574
+ +
Sbjct: 248 LSL 250
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 35.9 bits (79), Expect = 0.042
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAY 508
R PF+F +GK VI+ W GV M E LT AP + +
Sbjct: 239 RETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGF 279
Score = 35.5 bits (78), Expect = 0.055
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 274 ELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQ 417
++ QG+ G V+ HYV L+DGTK DSSR ++ + G+
Sbjct: 202 QILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGK 249
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 395 PFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFEIEM 574
P F +G VI IG+P MK GE+ + +Y Y + P NA+L ++ +
Sbjct: 128 PIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGY-GRAGFRGLIPRNASLTCKVRL 186
Query: 575 ID 580
+
Sbjct: 187 FN 188
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN PF F L VI+ I + M +GE + EY Y SQ + P A L FE
Sbjct: 189 RNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQ-GSPPEIPGGARLFFE 247
Query: 566 I 568
I
Sbjct: 248 I 248
>U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical
protein F56D1.2 protein.
Length = 718
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 449 VPTMKKGEVCILTCAPEYAYXSQVA-AHXXSPPNATLHFEIEMIDWRLEDLSPTXXQRAY 625
+PT G + L P Y SQ++ + + T H ++ I +RLE LS + Y
Sbjct: 98 LPTCPPGLID-LELKPVYVPKSQISYPYANLNISVTAHSSVDTIAFRLECLSASDGSDVY 156
Query: 626 CAHILEXWLQGLXQVPXXG 682
C++ ++ G+ + P G
Sbjct: 157 CSNSKAMYINGVKEWPCRG 175
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN PF F L + VI+ I + M +GE + ++ Y A P A L+F+
Sbjct: 194 RNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRA-PAIPGKARLYFD 252
Query: 566 IEM 574
I +
Sbjct: 253 ITL 255
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 386 RNEPFEFCLGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYXSQVAAHXXSPPNATLHFE 565
RN PF F L + VI+ I + M +GE + ++ Y A P A L+F+
Sbjct: 230 RNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRA-PAIPGKARLYFD 288
Query: 566 IEM 574
I +
Sbjct: 289 ITL 291
>AF040653-6|AAB95032.1| 508|Caenorhabditis elegans F-box b protein
protein 51 protein.
Length = 508
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 161 NLLMLLCYEFGICLETST*NETNIVFNRMHETAKEPNLKGFPISRN 24
NLL+ C + GIC + T E N +F + + +P L+ F I R+
Sbjct: 174 NLLLTSCSDIGICRQMLTDKEIN-MFLKHWISGLKPELENFCICRH 218
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 271 NELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQRWCNRSMENWC 450
NEL G + QGCH + V ++ + +D++ R +R+LFG + S+E
Sbjct: 275 NELKPPGAEPKKDGQGCHTLLFNVKLNINSSLWDTA---LRYIRLLFGFNLYSISLETTK 331
Query: 451 A-YNEEG*SLHS 483
+ E+ +LHS
Sbjct: 332 RNWEEQIDNLHS 343
>U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical
protein C18H9.5 protein.
Length = 464
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 298 NETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVR 402
N+TPN +VS + T+ DG F+SS+ + + V+
Sbjct: 223 NDTPNDHKNVSSTELRTIRDGKIFESSKHRPQNVK 257
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 271 NELPAQGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRXQKRTVRILFGQRWCNRSMENWC 450
NEL G + QGCH + V ++ + +D++ R +R+LFG + S+E
Sbjct: 275 NELKPPGAEPKKDGQGCHTLLFNVKLNINSSLWDTA---LRYIRLLFGFNLYSISLETTK 331
Query: 451 A-YNEEG*SLHS 483
+ E+ +LHS
Sbjct: 332 RNWEEQIDNLHS 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,693,634
Number of Sequences: 27780
Number of extensions: 374264
Number of successful extensions: 746
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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