Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C15
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.5  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 476 LSKDLDQNGDRDAYGDEDDHKNSWKFMSSWESNR 577
           ++ DL + G  DA+    D       + SWE NR
Sbjct: 193 IAVDLGKGGCNDAFAYMSDELGYGLIVYSWEQNR 226


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 352 VREINCVRFGIVKQLGNCVLYDVRTIRFGLKLLASFGCIIVVSGNY 215
           V  +NC+R   +  L  C+L   +T      LLAS     ++S  Y
Sbjct: 421 VNSVNCLRESFIGTLQRCLLSLEKTYERDTCLLASDALKQILSAAY 466


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 352 VREINCVRFGIVKQLGNCVLYDVRTIRFGLKLLASFGCIIVVSGNY 215
           V  +NC+R   +  L  C+L   +T      LLAS     ++S  Y
Sbjct: 459 VNSVNCLRESFIGTLQRCLLSLEKTYERDTCLLASDALKQILSAAY 504


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 61  VDVVDARAQNVS*ILNEIEDFNN 129
           VDV++A  + +  I NE+ED +N
Sbjct: 419 VDVINAAKELIFQIANELEDASN 441


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 797 EDFRIYGESENAAEXPXYFGW 859
           E F + G+S  A   P ++ W
Sbjct: 384 ESFGVMGDSATAMRDPIFYRW 404


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,843
Number of Sequences: 438
Number of extensions: 4716
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)