Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C14
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 38 0.013
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 38 0.013
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.38
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.51
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.51
Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.67
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 32 0.67
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.88
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 31 0.88
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 30 2.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.7
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 30 2.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 30 2.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.6
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.7
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 6.2
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 8.2
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 28 8.2
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 28 8.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 28 8.2
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 8.2
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 28 8.2
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 8.2
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 28 8.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 8.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.2
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -2
Query: 911 PXXGGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGX 732
P GG G P G GG P G GGPP G + GGPGG
Sbjct: 156 PLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPP-GHGGMGGPPPGQGGPGGPGGP 214
Query: 731 SPXXGXLPR 705
G LP+
Sbjct: 215 GGPGGMLPK 223
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/67 (35%), Positives = 26/67 (38%)
Frame = -2
Query: 926 GXXXXPXXGGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGG 747
G P GG+GGP G G PP G GGPP + G G G
Sbjct: 170 GMGGPPGHGGMGGPPGHG---------GQGGPPGHGG-MGGPPPG----QGGPGGPGGPG 215
Query: 746 GPGGXSP 726
GPGG P
Sbjct: 216 GPGGMLP 222
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 842 GXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSP 726
G PPP G G PP ++ G GGPGG P
Sbjct: 99 GGPPPGMPG--GVPPQAQPFNPHGGSMFGGPGGPGGPPP 135
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -2
Query: 911 PXXGGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGX 732
P GG G P G GG P G GGPP G + GGPGG
Sbjct: 436 PLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPP-GHGGMGGPPPGQGGPGGPGGP 494
Query: 731 SPXXGXLPR 705
G LP+
Sbjct: 495 GGPGGMLPK 503
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/67 (35%), Positives = 26/67 (38%)
Frame = -2
Query: 926 GXXXXPXXGGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGG 747
G P GG+GGP G G PP G GGPP + G G G
Sbjct: 450 GMGGPPGHGGMGGPPGHG---------GQGGPPGHGG-MGGPPPG----QGGPGGPGGPG 495
Query: 746 GPGGXSP 726
GPGG P
Sbjct: 496 GPGGMLP 502
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 842 GXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSP 726
G PPP G G PP ++ G GGPGG P
Sbjct: 379 GGPPPGMPG--GVPPQAQPFNPHGGSMFGGPGGPGGPPP 415
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 785 LSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
++G PP +P G PPP P G P PPP P
Sbjct: 709 ITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 31.5 bits (68), Expect = 0.88
Identities = 26/89 (29%), Positives = 28/89 (31%)
Frame = +2
Query: 449 APSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSRXPPXGXVPXXAAWXRTPIGAXPXG 628
APS + G P+ P PGL G P PP G P P P G
Sbjct: 695 APSTSAGGSSALPPITGGPPP-PPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGG 750
Query: 629 XLPXXRXPXPRCQXPTGLXXXRDVPPGXG 715
P P P P G PP G
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
P L + PP P G PPP G G P PPP P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 833 GGPPPXXXXRXGPXXGXGVPXPPPXXAG 916
GGPPP P G P PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 785 LSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
++G PP +P G PPP P G P PPP P
Sbjct: 709 ITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 31.5 bits (68), Expect = 0.88
Identities = 26/89 (29%), Positives = 28/89 (31%)
Frame = +2
Query: 449 APSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSRXPPXGXVPXXAAWXRTPIGAXPXG 628
APS + G P+ P PGL G P PP G P P P G
Sbjct: 695 APSTSAGGSSALPPITGGPPP-PPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGG 750
Query: 629 XLPXXRXPXPRCQXPTGLXXXRDVPPGXG 715
P P P P G PP G
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
P L + PP P G PPP G G P PPP P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 833 GGPPPXXXXRXGPXXGXGVPXPPPXXAG 916
GGPPP P G P PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 785 LSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
++G PP +P G PPP P G P PPP P
Sbjct: 292 ITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 31.5 bits (68), Expect = 0.88
Identities = 26/89 (29%), Positives = 28/89 (31%)
Frame = +2
Query: 449 APSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSRXPPXGXVPXXAAWXRTPIGAXPXG 628
APS + G P+ P PGL G P PP G P P P G
Sbjct: 278 APSTSAGGSSALPPITGGPPP-PPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGG 333
Query: 629 XLPXXRXPXPRCQXPTGLXXXRDVPPGXG 715
P P P P G PP G
Sbjct: 334 LPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
P L + PP P G PPP G G P PPP P
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 833 GGPPPXXXXRXGPXXGXGVPXPPPXXAG 916
GGPPP P G P PPP G
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGX-----PPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPG 738
GG GG G G GG PPPA G GG G G G GGG G
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGG 146
Query: 737 G 735
G
Sbjct: 147 G 147
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGX--PPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXS 729
GG GG G G GG PPP GG G G G GGG GG
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGG 89
Query: 728 PXXG 717
G
Sbjct: 90 GGCG 93
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPX 723
GG GG G G PP G GG G G G GGG GG
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGG 152
Query: 722 XG 717
G
Sbjct: 153 GG 154
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPP 904
P G PP +P G PPP R GP G+P PPP
Sbjct: 300 PPPPPGRTPGPPGMP----GMPPPPPPSRFGPPGMGGMPPPPP 338
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPP 904
P G PP +P G PPP R GP G+P PPP
Sbjct: 310 PPPPPGRTPGPPGMP----GMPPPPPPSRFGPPGMGGMPPPPP 348
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.51
Identities = 24/77 (31%), Positives = 25/77 (32%)
Frame = -2
Query: 926 GXXXXPXXGGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGG 747
G P GG G P G + G G PPP G G PP G G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGF-GPPPPGGPGAYGPPPTG--FPPVGAPPPGAAG 463
Query: 746 GPGGXSPXXGXLPRGXR 696
PGG G G R
Sbjct: 464 APGGNPFARGPSATGYR 480
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 803 APPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
APP Q G PPP + P G G P P GP
Sbjct: 309 APPQQQQQQFGAPPP----QGAPQQGFGAPPQGPPQGGP 343
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.51
Identities = 44/156 (28%), Positives = 52/156 (33%)
Frame = -2
Query: 845 GGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRGXRPALXTARSXF 666
GG PPPA G PP R+ + S G P G SP G PRG P + S
Sbjct: 318 GGSPPPAGTG--SPPPPPRQKRQAPERSPPTGSPPTG-SPPTGRPPRGG-PGKSSEESSE 373
Query: 665 GTSXXGXXPWEXRXGGRXLWGYGXTRPXTARGLXGAXXNRGXXRXPRVRGIPVXAXEGAX 486
P R G R G R + RG R P P +
Sbjct: 374 SREGPRGGP---RGGPR-----GGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGR 425
Query: 485 TARRSRXTGXREPEXEXPAXRPXRXPXXPEXXPTPS 378
R S TG P P+ + + PE PT S
Sbjct: 426 PPRGSPPTG--SPPTGLPSRQKRQ---APEDRPTGS 456
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 830 AGGPPPXXXXRXGPXX-GXGVPXPPPXXAGP 919
AG PPP + P G G P PPP P
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP 264
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/98 (27%), Positives = 31/98 (31%), Gaps = 2/98 (2%)
Frame = +2
Query: 422 GAXPXPRXLAPSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSR-XPPXGXV-PXXAAW 595
G+ P PR +P G P P P P G P R PP G + P A
Sbjct: 262 GSPPPPRTGSPP--PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Query: 596 XRTPIGAXPXGXLPXXRXPXPRCQXPTGLXXXRDVPPG 709
P G P + P PTG P G
Sbjct: 320 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.51
Identities = 44/156 (28%), Positives = 52/156 (33%)
Frame = -2
Query: 845 GGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRGXRPALXTARSXF 666
GG PPPA G PP R+ + S G P G SP G PRG P + S
Sbjct: 339 GGSPPPAGTG--SPPPPPRQKRQAPERSPPTGSPPTG-SPPTGRPPRGG-PGKSSEESSE 394
Query: 665 GTSXXGXXPWEXRXGGRXLWGYGXTRPXTARGLXGAXXNRGXXRXPRVRGIPVXAXEGAX 486
P R G R G R + RG R P P +
Sbjct: 395 SREGPRGGP---RGGPR-----GGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGR 446
Query: 485 TARRSRXTGXREPEXEXPAXRPXRXPXXPEXXPTPS 378
R S TG P P+ + + PE PT S
Sbjct: 447 PPRGSPPTG--SPPTGLPSRQKRQ---APEDRPTGS 477
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 830 AGGPPPXXXXRXGPXX-GXGVPXPPPXXAGP 919
AG PPP + P G G P PPP P
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP 285
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/98 (27%), Positives = 31/98 (31%), Gaps = 2/98 (2%)
Frame = +2
Query: 422 GAXPXPRXLAPSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSR-XPPXGXV-PXXAAW 595
G+ P PR +P G P P P P G P R PP G + P A
Sbjct: 283 GSPPPPRTGSPP--PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Query: 596 XRTPIGAXPXGXLPXXRXPXPRCQXPTGLXXXRDVPPG 709
P G P + P PTG P G
Sbjct: 341 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 378
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.51
Identities = 44/156 (28%), Positives = 52/156 (33%)
Frame = -2
Query: 845 GGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRGXRPALXTARSXF 666
GG PPPA G PP R+ + S G P G SP G PRG P + S
Sbjct: 324 GGSPPPAGTG--SPPPPPRQKRQAPERSPPTGSPPTG-SPPTGRPPRGG-PGKSSEESSE 379
Query: 665 GTSXXGXXPWEXRXGGRXLWGYGXTRPXTARGLXGAXXNRGXXRXPRVRGIPVXAXEGAX 486
P R G R G R + RG R P P +
Sbjct: 380 SREGPRGGP---RGGPR-----GGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGR 431
Query: 485 TARRSRXTGXREPEXEXPAXRPXRXPXXPEXXPTPS 378
R S TG P P+ + + PE PT S
Sbjct: 432 PPRGSPPTG--SPPTGLPSRQKRQ---APEDRPTGS 462
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 830 AGGPPPXXXXRXGPXX-GXGVPXPPPXXAGP 919
AG PPP + P G G P PPP P
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP 270
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/98 (27%), Positives = 31/98 (31%), Gaps = 2/98 (2%)
Frame = +2
Query: 422 GAXPXPRXLAPSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSR-XPPXGXV-PXXAAW 595
G+ P PR +P G P P P P G P R PP G + P A
Sbjct: 268 GSPPPPRTGSPP--PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Query: 596 XRTPIGAXPXGXLPXXRXPXPRCQXPTGLXXXRDVPPG 709
P G P + P PTG P G
Sbjct: 326 SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 363
>Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical
protein K02E11.10 protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.67
Identities = 31/103 (30%), Positives = 33/103 (32%), Gaps = 1/103 (0%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGXPPPAXK-G*XGGPPXSRKGXRXGXGSRXXGGGPGGXSP 726
GG GG G GG P PA G GG + G G GGGPGG
Sbjct: 83 GGAGGSYAAPALGGGLGGFGGAPAPAPAFGGLGGGYQAAPALGGGLGG-GLGGGPGG--- 138
Query: 725 XXGXLPRGXRPALXTARSXFGTSXXGXXPWEXRXGGRXLWGYG 597
P P L FG G GG+ G G
Sbjct: 139 GYQAAPALQLPGLGAPAPAFGGLGGGYQGAPTLGGGQAQGGAG 181
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = -2
Query: 899 GVGGPXXXGXARXGXXXXGGXPPPAXK----G*XGGPPXSRKGXRXGXGSRXXGGGPGGX 732
GVGG G GG PPP GG + G G GGG GG
Sbjct: 22 GVGGGPAGGGGGNKSAGGGGAPPPGVSCYLGAGAGGAASGSQSAYFGVGGGPVGGGGGGG 81
Query: 731 SP 726
+P
Sbjct: 82 AP 83
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 915 PAXXGGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGGATAXPEREXG 775
P G G P P G GGG PA G G T P + G
Sbjct: 56 PNSQAGDSGKPNPPAGDPTKLKPGGGGPAGKPGPNAGDTTKPNSQSG 102
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.88
Identities = 32/128 (25%), Positives = 35/128 (27%)
Frame = -2
Query: 911 PXXGGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGX 732
P G GP G PP G GGP G R G R GP G
Sbjct: 147 PGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGE 206
Query: 731 SPXXGXLPRGXRPALXTARSXFGTSXXGXXPWEXRXGGRXLWGYGXTRPXTARGLXGAXX 552
+ RP R G + P G+ G P A G G
Sbjct: 207 PGTEYKPGQPGRPGPPGPRGEAGPAGQPGSPGNDGESGKP-GNAGRPGPPGAPGKNGTPG 265
Query: 551 NRGXXRXP 528
RG P
Sbjct: 266 VRGEDAAP 273
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/127 (29%), Positives = 41/127 (32%), Gaps = 8/127 (6%)
Frame = -1
Query: 915 PAXXGGGXGTPXPXXGPXRXXXXGGG-------PPACXEGMXGGATAXPEREXGRXXXPX 757
P GGG G P P GGG PAC G GG P G P
Sbjct: 38 PCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAP-IGGGYAQAPQ 96
Query: 756 XXXXXXXXXPQXRXPXPGGTSRXXXSPVGXWHLGXGXRXXGRXP-XGXAPMGVRXHAAXX 580
PQ P GG +P+G G G P G AP+G A
Sbjct: 97 APIGGGYAAPQ--APIGGG---YGGAPIG------GGSYAGAGPIGGGAPIG--GGAGYA 143
Query: 579 GTXPXGG 559
G P GG
Sbjct: 144 GAAPAGG 150
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 579 GTXPXGGXREQGXPAXPPSPGDTGXRLXGSGXRSPQPXDRXEG 451
G P GG PP PG G + GSG + Q + +G
Sbjct: 30 GLGPQGGTTAASGQPQPPQPGQPGGQQTGSGPGAGQQPGQGQG 72
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Frame = -2
Query: 818 G*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRGXRPALXTARSXFGTSXXGXXP 639
G GG P G G GGGPGG G G +G + G
Sbjct: 23 GGWGGGPGRWGGW--GGNRWGGGGGPGGWGNNGGG---GWGRGGGRGGGDWGGNNGGGGN 77
Query: 638 WEXRXGGRXLWG--YGXTRPXTARGLXGAXXNRG 543
W GGR WG G R RG G N G
Sbjct: 78 WGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGG 111
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.9 bits (64), Expect = 2.7
Identities = 47/166 (28%), Positives = 52/166 (31%), Gaps = 5/166 (3%)
Frame = +2
Query: 437 PRXLAPSXRSXGCGERXPLPXRRXPVSPGLGGXAGXPCSRXPPXGXVPXXAAWXRTPIGA 616
P PS G + P P PG G +G P S PP P A P G
Sbjct: 157 PSGAPPSGGPPGLFDPSGAPPSGGP--PGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGP 214
Query: 617 -XPXGXLPXXRXPXPRCQXPTGLXXXRDVPPGXGSLXWGXXXXXXXXXXGXXFRPXSLSG 793
P G P P P P+G PPG + F P
Sbjct: 215 FDPSGAPPSGGPPGP--FNPSGAPPSGG-PPG----PFDPSGAPPSGGPPGPFNPSGAPP 267
Query: 794 XAVAP-PFIPS--XQAGGPPPXXXXRXGPXXGXGVPXP-PPXXAGP 919
P PF PS +GGPP P G G P P P A P
Sbjct: 268 SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG-GPPGPFDPSGAQP 312
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 797 AVAPPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAGP 919
A+A F + GGP P G G G P PPP AGP
Sbjct: 203 ALAVCFFTQPRGGGPAPGAPRAGGSGAG-GAPRPPP-PAGP 241
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.9 bits (64), Expect = 2.7
Identities = 36/149 (24%), Positives = 41/149 (27%), Gaps = 4/149 (2%)
Frame = -1
Query: 903 GGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGGATAXPEREXG----RXXXPXXXXXXXX 736
GGG G P P GGG PA GG P+ G +
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGAPAA-----GGYAVAPQAPIGGGYAQPGGGYGGAGGFG 77
Query: 735 XXPQXRXPXPGGTSRXXXSPVGXWHLGXGXRXXGRXPXGXAPMGVRXHAAXXGTXPXGGX 556
Q GG S P+G G G P G G A G GG
Sbjct: 78 GAYQAAPAIGGGGSYAGAGPIGGGFGGAQGGYAGAGPIGGGAQGGYAGAGPIGGGAQGGY 137
Query: 555 REQGXPAXPPSPGDTGXRLXGSGXRSPQP 469
G G G G+G + P
Sbjct: 138 AGAGPIGGGAQGGYAGPIGGGAGYQGGAP 166
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = -1
Query: 714 PXPGGTSRXXXSPVGXWHLGXGXRXXGRXPXGXAPMGVRXHAAXXGTXPXGGXREQGXPA 535
P P G +P G P G P G G GG + G P
Sbjct: 219 PGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPG 278
Query: 534 XPPSPGDTG 508
P PG+ G
Sbjct: 279 PPGPPGNDG 287
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.7
Identities = 35/145 (24%), Positives = 39/145 (26%), Gaps = 5/145 (3%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGGATAXPEREXGRXXXPXXXX 748
G GP G G P P G P C E T P E G P
Sbjct: 103 GLPGPDGPPGKNGAPGRPGAPGAPGFPGRPPAVCEEITEPPCTPCPPGEPGPPGPPGDAG 162
Query: 747 XXXXXXPQXRXPXPGGTS-RXXXSPVGXWHLGXGXRXXGRXPXGXAPMGVRXHAAXXGT- 574
R GG + P G + G G R R G + G
Sbjct: 163 NPGQSGHPGRNGNDGGVGPQGPPGPPG--NNGEGGRDGPRGEQGRPAISTPALPGDPGAP 220
Query: 573 ---XPXGGXREQGXPAXPPSPGDTG 508
P G +QG P S G G
Sbjct: 221 GEPGPSGLPGDQGQAGRPGSDGAPG 245
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGPXXGXGV-----PXPPPXXAGP 919
P + G A PP GGPP P G GV P PP GP
Sbjct: 67 PRTTMGMAPVPPVGHHPMMGGPPGMPMMAPRPFPGPGVGFPGAPGMPPFPGGP 119
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGP-----XXGXGVPXPPPXXAGP 919
P + + APPFIPS Q PP + P G P PPP P
Sbjct: 478 PNRMGYSSDAPPFIPSHQQQPPPQFFNSQHLPQRFRGGRQRGAPPPPPPQPMP 530
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 776 PXSLSGXAVAPPFIPSXQAGGPPPXXXXRXGP-----XXGXGVPXPPPXXAGP 919
P + + APPFIPS Q PP + P G P PPP P
Sbjct: 478 PNRMGYSSDAPPFIPSHQQQPPPQFFNSQHLPQRFRGGRQRGAPPPPPPQPMP 530
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -1
Query: 606 GVRXHAAXXGTXPXGGXREQGXPAXPPSPGDTGXR-LXGSGXRSPQPXDR 460
G R H + G QG P P PG+ G G RS QP +R
Sbjct: 213 GRRGHGSPGAPGRAGQPGRQGAPGNPGRPGERGPSGPCGPAGRSGQPGNR 262
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGGATA 796
G GPA G G P P + GG PA G G A A
Sbjct: 144 GPPGPAGTPGAPGAPGNAGAPGQDSFGGGPGPAGPTGPTGDAGA 187
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -2
Query: 902 GGVGGPXXXGXARX--GXXXXGGXP-PPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPG 738
G G P G G G P PP G G P S G G G + G PG
Sbjct: 221 GNAGAPGAPGQVVDVPGTPGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPG 278
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = -2
Query: 842 GXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRGXRPAL 687
G PPP +G G P +G G G P G +P RP +
Sbjct: 205 GGPPPGAQGMPQGYPGVSRGGPTPGQPMGRGAMMNGAMPRSGPMPTQGRPGI 256
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = -2
Query: 842 GXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRGXRPAL 687
G PPP +G G P +G G G P G +P RP +
Sbjct: 205 GGPPPGAQGMPQGYPGVSRGGPTPGQPMGRGAMMNGAMPRSGPMPTQGRPGI 256
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 15/80 (18%)
Frame = -2
Query: 911 PXXGGVGGPXXXGXARXGXXXXGGX--PPPAX--KG*XGG-----------PPXSRKGXR 777
P GG GG G G GG PPPA G GG PP + G
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Query: 776 XGXGSRXXGGGPGGXSPXXG 717
G G GGG GG G
Sbjct: 83 CGGGGGGCGGGGGGCGGGGG 102
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 15/80 (18%)
Frame = -2
Query: 911 PXXGGVGGPXXXGXARXGXXXXGGX--PPPAX--KG*XGG-----------PPXSRKGXR 777
P GG GG G G GG PPPA G GG PP + G
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Query: 776 XGXGSRXXGGGPGGXSPXXG 717
G G GGG GG G
Sbjct: 83 CGGGGGGCGGGGGGCGGGGG 102
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGPG 738
G GGP G G G P PA +G GPP G + G G PG
Sbjct: 150 GPAGGPGPKGPP--GPPGGHGEPGPAGRGGPRGPP-GPGGPQGEAGEDGGAGNPG 201
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXG--GGPPACXEGMXGGATAXP--EREXGRXXXP 760
G GPA G G P P GP G G P A G P E + G+ P
Sbjct: 159 GSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPGRP 218
Query: 759 XXXXXXXXXXPQXRXPXPG 703
P PG
Sbjct: 219 GPQGPRGETGPAGNPGAPG 237
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXG--GGPPACXEGMXGGATAXP--EREXGRXXXP 760
G GPA G G P P GP G G P A G P E + G+ P
Sbjct: 153 GSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPGRP 212
Query: 759 XXXXXXXXXXPQXRXPXPG 703
P PG
Sbjct: 213 GPQGPRGETGPAGNPGAPG 231
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGG 805
G G GGG G P GP GGG G GG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG 258
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGP 741
GG GG G A+ G G P +G GG + G G + GGP
Sbjct: 184 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGP 237
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGG 805
G G GGG G P GP GGG G GG
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG 220
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -2
Query: 902 GGVGGPXXXGXARXGXXXXGGXPPPAXKG*XGGPPXSRKGXRXGXGSRXXGGGP 741
GG GG G A+ G G P +G GG + G G + GGP
Sbjct: 222 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGP 275
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 927 GXXGPAXXGGGXGTPXPXXGPXRXXXXGGGPPACXEGMXGG 805
G G GGG G P GP GGG G GG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG 258
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = -2
Query: 833 PPAXKG*XGGP-PXSRKGXRXGXGSRXXGGGPGGXSPXXGXLPRG 702
PP G GGP P G G+ GGG G P P G
Sbjct: 176 PPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAG 220
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 806 PPFIPSXQAGGPPPXXXXRXGPXXGXGVPXPPPXXAG 916
PP +P +G PPP P G P PPP G
Sbjct: 565 PPPLPQNLSGAPPPPPPP---PPMLGGPPPPPPPPGG 598
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,872,500
Number of Sequences: 27780
Number of extensions: 197531
Number of successful extensions: 1577
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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