Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C10
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0431 - 9327167-9327226,9327347-9327474,9327594-9327709,932...    61   1e-09
02_05_1044 + 33728623-33728768,33728814-33728993,33729446-337295...    37   0.025
12_02_1127 - 26334225-26334500,26334600-26334761,26334849-263349...    30   2.8  
12_02_0674 - 21745321-21746223,21746229-21747608                       29   4.9  
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621...    29   4.9  
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904...    29   4.9  

>09_02_0431 -
           9327167-9327226,9327347-9327474,9327594-9327709,
           9327816-9327895,9328787-9328912,9329676-9329856,
           9330514-9330578,9330655-9330915
          Length = 338

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
 Frame = +1

Query: 526 GIRN--YGVSVTGYLNHPSKGLCIWLQQRSFTKQTWPGKWDCFVSGGLAVGFGILETTIK 699
           GIRN  YGV + GY+    +   +W+ +RS TKQT+PG  D  V+GGL  G    E  IK
Sbjct: 165 GIRNEAYGVHMNGYVEKEGQKF-LWIAKRSDTKQTFPGMLDHLVAGGLPYGISCEENVIK 223

Query: 700 EAAXEASVEGELVKNWYQL-AV*VSIXXRARPVXNTEYVYDLELPLD 837
           E   EA +   +  N   + A+        R   +  + YDL+LP D
Sbjct: 224 ECEEEAGIPRSISSNATSVGAISYMDIEGFRYKRDVLFCYDLKLPPD 270


>02_05_1044 +
           33728623-33728768,33728814-33728993,33729446-33729523,
           33729834-33729930,33730206-33730339,33730944-33731025,
           33731631-33731717,33731875-33731981,33732674-33732845,
           33733018-33733259,33733482-33733563,33733954-33734019,
           33734040-33734159,33734935-33735012,33735083-33735178,
           33735791-33735897,33736031-33736199,33736402-33736452,
           33736567-33736650,33736946-33737040,33737175-33737265,
           33737342-33737488,33737614-33737676
          Length = 857

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 595 LQQRSFTKQTWPGKWDCFVSGGLAVGFGILETTIKEAAXEASVE 726
           LQ+R+  K TWPG+WD   +G ++ G   L +  +E   E  ++
Sbjct: 76  LQRRADCKDTWPGQWDISSAGHISAGDSSLSSAQRELDEELGIK 119


>12_02_1127 -
           26334225-26334500,26334600-26334761,26334849-26334938,
           26335075-26335236,26335330-26335431,26335562-26335633,
           26335716-26335851,26335939-26336120,26336387-26336406,
           26336440-26336521,26336612-26336713,26336796-26336909,
           26337412-26337462,26337583-26337651,26337972-26338049,
           26338357-26338458,26338785-26338865,26339008-26339109,
           26339217-26339576
          Length = 780

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +2

Query: 530 LEIMASVSPAISIIPVKDYAFGYSSGVLPNKLGLVNGIALLAVVSRWDLVF 682
           L +   V PA  ++        + +GV+ N+ GL+  +  + ++S W ++F
Sbjct: 103 LGVTVLVVPAFRVVKASPILGFFCAGVVLNQFGLIRNLTDVKLLSEWGILF 153


>12_02_0674 - 21745321-21746223,21746229-21747608
          Length = 760

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 500 WTGVPY-AYLVLEIMASVS-PAISIIPVKDYAFGYSSGVLPNKLGLVNGIALLAVVS 664
           W G    +Y  +   A++  PA++++   D   G  +G LP +LGL+  +AL  V S
Sbjct: 100 WVGADVCSYFGITCAAALDDPAVTVVAGVDLNGGDIAGYLPAELGLMTDLALFHVNS 156


>11_01_0737 +
           6211149-6211466,6212022-6212183,6212290-6213101,
           6213188-6213395,6214157-6214364,6214752-6215206,
           6215585-6216011,6216391-6216471,6216571-6216761,
           6216855-6216998
          Length = 1001

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = +1

Query: 205 YLSGLHQGICKPFIVAGHQVGLVRPDVLKYLQRFPEVFRIAGKYVELNPAFRDYKERTTR 384
           Y+  L  G    FIV G +V    PDV+    + P    I+GK+ E   +F    +RTT+
Sbjct: 308 YVPLLMCGKLSMFIVMGAEVDGSAPDVVHDKDKLPSNEEISGKFGEAPVSF--LVDRTTK 365

Query: 385 V 387
           V
Sbjct: 366 V 366


>06_01_1101 -
           9044679-9045320,9045484-9045890,9046020-9046274,
           9046375-9046498,9047237-9047289,9047388-9047648,
           9047795-9047848,9047975-9048458,9048554-9048592
          Length = 772

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 514 ICLFGIRNYGVSVTGYLNHPSKGLCIWL 597
           +CLF +++YG    G+L  P   +C+WL
Sbjct: 204 VCLFALQHYGTHRVGFLFAPI--VCLWL 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,518,845
Number of Sequences: 37544
Number of extensions: 468880
Number of successful extensions: 1031
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)