Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C10
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    25   0.92 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   2.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   2.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   6.5  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 194 NLRASFNKSETLFCAEFISFIIFFHL 117
           N  A+++ S TL  AE+   +++FHL
Sbjct: 184 NPTANYSASTTLSHAEYSMLLVYFHL 209


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -3

Query: 773 IETYTASWYQFFTNSPSTDASXAASFIVVSRIPNPTARP 657
           + ++  +W+ +   S    A     F  VS++P P + P
Sbjct: 22  VTSHRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 657 WSRGGIWYSRDN 692
           WSRG  W S DN
Sbjct: 23  WSRGNTWLSLDN 34


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 657 WSRGGIWYSRDN 692
           WSRG  W S DN
Sbjct: 23  WSRGNTWLSLDN 34


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 427 CALKGWRDECFEVSTAFYQESLLEMDRSAICLFGIR 534
           C L G  D  F   TA  +E +   D + IC  G R
Sbjct: 582 CLLDGKGDVAFVPLTALSEEGVQSKDLALICPDGGR 617


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 427 CALKGWRDECFEVSTAFYQESLLEMDRSAICLFGIR 534
           C L G  D  F   TA  +E +   D + IC  G R
Sbjct: 582 CLLDGKGDVAFVPLTALSEEGVQSKDLALICPDGGR 617


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 427 CALKGWRDECFEVSTAFYQESLLEMDRSAICLFGIR 534
           C L G  D  F   TA  +E +   D + IC  G R
Sbjct: 582 CLLDGKGDVAFVPLTALSEEGVQSKDLALICPDGGR 617


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 347 FNSTYFPAILNTSGKRCKYFKTS 279
           F  TYFP+++  +    K+F  S
Sbjct: 41  FVGTYFPSLIGANEHYSKFFPVS 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,317
Number of Sequences: 438
Number of extensions: 4953
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)