Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C08
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 125 5e-29
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 115 4e-26
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 89 4e-18
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 89 4e-18
12_02_1165 + 26633371-26633679,26635183-26635276,26635732-266358... 34 0.13
06_01_1076 - 8778210-8778734 30 2.8
04_03_0055 + 10299539-10299703,10300042-10300746,10301025-103011... 29 3.7
01_06_0439 + 29398980-29399190,29399910-29400010 29 3.7
04_01_0275 + 3648866-3649951 29 4.9
10_07_0126 - 13143485-13144117,13144204-13145238 29 6.4
02_05_0134 + 26161904-26162776 29 6.4
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 28 8.5
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 125 bits (301), Expect = 5e-29
Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Frame = +2
Query: 131 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 310
Y+LFE ++G+ LF +E+ + V SV DL RF V L AF P SA+ AL
Sbjct: 4 YLLFESASGYGLFHAYGIDEIGQSVDAVRASVVDLDRFGKAVKLAAFTPFSSAVDALNQC 63
Query: 311 NAVSEGILPEDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPE 484
NA+SEGI+ ++L FLE LPK K K++K +LGV++PK+G+ ISE I C V E
Sbjct: 64 NAISEGIMTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFVQE 123
Query: 485 ILRGIRYHFHSLIKGLTLKACSVAQLGLG 571
+LRG+R HF I L AQLGLG
Sbjct: 124 LLRGVRLHFDRFISELKKSDLEKAQLGLG 152
Score = 117 bits (281), Expect = 1e-26
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +3
Query: 561 LALGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIXEWYSYHFPXLVSIVP 740
L LGHSYSRA+VKFNV+RVDNM+IQ+I LLD LDKD+N+FSMR+ EW+ +HFP LV IV
Sbjct: 149 LGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWFGWHFPELVKIVN 208
Query: 741 ENHLYTKCAEFIKXRKTL 794
+N++Y K A++IK + L
Sbjct: 209 DNYIYAKLADYIKDKSEL 226
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 115 bits (277), Expect = 4e-26
Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Frame = +2
Query: 131 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 310
Y+LFE ++G+ALF +E+ + SV +LQRF+ V L F P SA+ AL
Sbjct: 4 YLLFESASGYALFHAHGVDEIGQGVDAARASVLELQRFSKAVKLAGFSPFSSAVDALNQC 63
Query: 311 NAVSEGILPEDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPE 484
NA+SEGI+ ++L FLE LPK K K++K ++GV++PK+G+ ISEA I C V E
Sbjct: 64 NAISEGIMTDELRSFLELNLPKVKEGKKAKYSVGVMEPKVGSHISEATGIPCQCNEFVQE 123
Query: 485 ILRGIRYHFHSLIKGLTLKACSVAQLGLGSLIL 583
+LRG+R HF I L + + A + G + +
Sbjct: 124 LLRGVRLHFDHFIDQLKVVDFTFALVSTGHVAM 156
Score = 98.3 bits (234), Expect = 7e-21
Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 20/98 (20%)
Frame = +3
Query: 561 LALGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRI---------------- 692
L LGHSYSRA+VKFNV+RVDNM+IQ+I LLD LDKD+N+FSMR+
Sbjct: 187 LGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVSLFFPLFYAMINSGGE 246
Query: 693 ----XEWYSYHFPXLVSIVPENHLYTKCAEFIKXRKTL 794
EWYS+HFP LV IV +N++Y+K A+F+ + L
Sbjct: 247 SLPPREWYSWHFPELVKIVNDNYVYSKIAKFVVNKSDL 284
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 89.0 bits (211), Expect = 4e-18
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 558 SLALGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIXEWYSYHFPXLVSIV 737
SL L HS SR ++KF+ +VD MIIQ+I LLD LDK++NT++MR+ EWY +HFP L IV
Sbjct: 137 SLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIV 196
Query: 738 PENHLYTKCAEFIKXR 785
+N Y K + + R
Sbjct: 197 ADNIQYAKVVKMMGDR 212
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/145 (35%), Positives = 68/145 (46%)
Frame = +2
Query: 134 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 313
VLFE AGFALF+V + +L + + + T VV L AF ++ AL
Sbjct: 3 VLFETPAGFALFKVLDEGKLDK-VEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAAT 61
Query: 314 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 493
+ + + L FL+ K TL V D KLG AI E L+I C H AV E++R
Sbjct: 62 LIIDSKPTKGLRKFLQ------KHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMR 115
Query: 494 GIRYHFHSLIKGLTLKACSVAQLGL 568
G+R LI GL + LGL
Sbjct: 116 GLRNQLTELISGLGAQDLGPMSLGL 140
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 89.0 bits (211), Expect = 4e-18
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 558 SLALGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIXEWYSYHFPXLVSIV 737
SL L HS SR ++KF+ +VD MIIQ+I LLD LDK++NT++MR+ EWY +HFP L IV
Sbjct: 137 SLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIV 196
Query: 738 PENHLYTKCAEFIKXR 785
+N Y K + + R
Sbjct: 197 ADNIQYAKVVKMMGDR 212
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/145 (35%), Positives = 68/145 (46%)
Frame = +2
Query: 134 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 313
VLFE AGFALF+V + +L + + + T VV L AF ++ AL
Sbjct: 3 VLFETPAGFALFKVLDEGKLDK-VEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAAT 61
Query: 314 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 493
+ + + L FL+ K TL V D KLG AI E L+I C H AV E++R
Sbjct: 62 LIIDSKPTKGLRKFLQ------KHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMR 115
Query: 494 GIRYHFHSLIKGLTLKACSVAQLGL 568
G+R LI GL + LGL
Sbjct: 116 GLRNQLTELISGLGAQDLGPMSLGL 140
>12_02_1165 +
26633371-26633679,26635183-26635276,26635732-26635822,
26636112-26636199,26636300-26636341,26636648-26636809,
26636915-26637094,26637280-26637447,26637977-26638195
Length = 450
Score = 34.3 bits (75), Expect = 0.13
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 134 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 313
+LFE +GFA+FRV++ L + + S TD + VV I F V + N
Sbjct: 172 MLFETPSGFAMFRVSDV--LFRYPEDIWSSFTDPHTAHQVVRTIGFIEVGDKSVVWD--N 227
Query: 314 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTG-AVPEIL 490
+ G ED+ F+ K +L V D +L I + L I C G VPE++
Sbjct: 228 DIGPG---EDIEHFI-------LKFPIKSLVVPDAQLKFIIEKNLNISCWFNGRIVPELI 277
Query: 491 RGIRY 505
G+ Y
Sbjct: 278 WGLNY 282
>06_01_1076 - 8778210-8778734
Length = 174
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 409 TGSQ-ARSSHQRGPGNSVHAYRSSSGDFERHTLSLPLA--HQRSYPQSMQCGTAWPWVTH 579
TG+Q A + GPGNSVHA S H + L + R + S++ +W
Sbjct: 7 TGNQQATQQGKAGPGNSVHAGNEVSFSILTHGIHLKFVRLYHRHHLASLKLKVSWVLGAS 66
Query: 580 THELVSSSMFTE 615
+ + SS+ E
Sbjct: 67 SISFLCSSIHVE 78
>04_03_0055 +
10299539-10299703,10300042-10300746,10301025-10301116,
10302896-10303313
Length = 459
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 495 PLKISGTAPVCVH*ISRASLMAAPSLGSSTPSVHFDRFFLFGRPPSRNRFKSSGR 331
PL + T+P+ + +++P S PS H R F+F + P+ N + GR
Sbjct: 324 PLVLHATSPLRLLCTLHGPRLSSPK-PSHQPSTHLPRCFIFPQNPTSNELELMGR 377
>01_06_0439 + 29398980-29399190,29399910-29400010
Length = 103
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 358 RRWSSKEEETVKMHTRCTGSQARSSHQRGPGNSVHAYRSSSGDFERHTLSLPLAHQR 528
++W+S+EEE ++ G + Q+ P S S+ D + L+LPL H+R
Sbjct: 6 QKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSRSNIDLKVQPLTLPLRHRR 62
>04_01_0275 + 3648866-3649951
Length = 361
Score = 29.1 bits (62), Expect = 4.9
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Frame = +2
Query: 173 VAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSA--IVALENINAVSEGILPEDL 346
V E +E AFLP+ +ESV L V + +P ++A LE I +S+ ++ L
Sbjct: 95 VRELDEALAFLPEFQESVLILHIATNVFYGLCIEPDQNAASFKQLEAIKTLSDYMV--FL 152
Query: 347 NLFLEGGLPKRKKRS--KCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 493
G LP K RS + T L+ KL + + + T + EILR
Sbjct: 153 VAVRPGMLPGLKLRSLYEATQKALE-KLWSEQRRSCNCKRTKERCLAEILR 202
>10_07_0126 - 13143485-13144117,13144204-13145238
Length = 555
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 702 YSYHFPXLVSIVPENHLYTKCAEFIKXRKTLXRXVIXXRSLR 827
+S H P L + NH+ +CA + + R VI LR
Sbjct: 268 WSDHLPWLAHLYDPNHVARRCAALVPRVQAFVRGVIRDHRLR 309
>02_05_0134 + 26161904-26162776
Length = 290
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 537 SKHAVWHSLALGHSYSRARVKFN-VH-RVDNMIIQSIALLDQL 659
+K A W S + H Y+ R +++ +H RV+++ + +AL DQ+
Sbjct: 112 NKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQV 154
>09_02_0393 +
8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 341 DLNLFLEGGLPKRKKR-SKCTLGVLDP--KLGAAISEALEIQCTHTGAVPEILRGIRYHF 511
DL L + GL +++ R S+CT +LDP G + L I G + R ++ H
Sbjct: 594 DLGLIDQEGLCRKESRISRCTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHE 653
Query: 512 HSLIKGLTLKACSVAQLG 565
+ K ++ S+ +G
Sbjct: 654 YETCKAGAVRLISIVAMG 671
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,854,572
Number of Sequences: 37544
Number of extensions: 455942
Number of successful extensions: 1148
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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