Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C08
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical pr...   119   2e-27
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...    83   3e-16

>Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical
           protein K07C5.4 protein.
          Length = 486

 Score =  119 bits (287), Expect = 2e-27
 Identities = 61/148 (41%), Positives = 91/148 (61%), Gaps = 1/148 (0%)
 Frame = +2

Query: 131 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 310
           +VL+EH+AG+AL ++ EF++    L +V+ +  D  +F+ +V L +F P K+   ALEN 
Sbjct: 7   FVLYEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALENC 66

Query: 311 NAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEAL-EIQCTHTGAVPEI 487
           N++SEG+   DL  FL+  LPK+KK     LG+ D KL  +++EA  +++    G + EI
Sbjct: 67  NSISEGLAHPDLTNFLQKSLPKKKKH--VVLGINDSKLAGSLTEAFPDLKLVFGGVITEI 124

Query: 488 LRGIRYHFHSLIKGLTLKACSVAQLGLG 571
           LRG R HF  L K L   + S AQL LG
Sbjct: 125 LRGTRVHFERLAKNLPHHSLSKAQLSLG 152



 Score =  115 bits (277), Expect = 4e-26
 Identities = 53/93 (56%), Positives = 67/93 (72%)
 Frame = +3

Query: 516 RSSKVLPSKHAVWHSLALGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIX 695
           R +K LP        L+LGHSYSR++VKF+VHRVDNM+IQSIALLDQLDKD+N F MRI 
Sbjct: 134 RLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINLFGMRIR 193

Query: 696 EWYSYHFPXLVSIVPENHLYTKCAEFIKXRKTL 794
           EWYSYH+P L  + P+ + Y++ A  I  R  +
Sbjct: 194 EWYSYHYPELFRLAPDQYKYSRLAVAILDRNKM 226


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
           protein W01B11.3 protein.
          Length = 487

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 33/77 (42%), Positives = 53/77 (68%)
 Frame = +3

Query: 558 SLALGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIXEWYSYHFPXLVSIV 737
           +LA+ HS +R +VKFN  ++D MI+Q+++LLD LDK++N + MR+ EWY +HFP L   +
Sbjct: 137 NLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTI 196

Query: 738 PENHLYTKCAEFIKXRK 788
            ++  Y K  + I  R+
Sbjct: 197 QDHQAYAKIIKAIGMRQ 213



 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 38/130 (29%), Positives = 72/130 (55%)
 Frame = +2

Query: 134 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 313
           VLFE +AG+A+F+++  ++L   +  + E  +  ++    + L++F+  K+   A+E  +
Sbjct: 3   VLFEVAAGYAVFKLSNEKKLKN-VDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEATS 61

Query: 314 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 493
            ++EG L + L   L+  + + +K     L V D KLG  I E L + C H  ++ E++R
Sbjct: 62  EITEGKLSKTLKKLLKSSVDETEK-----LAVGDAKLGNLIKEKLSLNCVHDSSINELMR 116

Query: 494 GIRYHFHSLI 523
           G+R H   L+
Sbjct: 117 GVRAHIEDLL 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,051,393
Number of Sequences: 27780
Number of extensions: 401493
Number of successful extensions: 916
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)