Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C08
         (872 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   2.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.8  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   8.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   8.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.5  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 254  QQH*NVANLSRTLRPEAGKPLTLQIQQ 174
            QQ    + + R +    GKP+ +QIQQ
Sbjct: 1074 QQSIQTSGMQRIIAQIGGKPIAVQIQQ 1100


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 18/80 (22%), Positives = 31/80 (38%)
 Frame = +1

Query: 367 SSKEEETVKMHTRCTGSQARSSHQRGPGNSVHAYRSSSGDFERHTLSLPLAHQRSYPQSM 546
           +S  +E  K H +    + + S +  P   V   +S       H  S P     S  Q+ 
Sbjct: 634 NSLMDEAYKPHKKFRALRQKDSAEAEPAVIVQHTQSQ---LHLHLTSPPARSPSSQAQAS 690

Query: 547 QCGTAWPWVTHTHELVSSSM 606
           QC      ++ TH  ++ S+
Sbjct: 691 QCPQTASLLSSTHSTLARSL 710


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 418 QARSSHQRGPGNSVHAYRSSSGDF 489
           + +S  QRGPG  +  Y   +G F
Sbjct: 104 KGQSEVQRGPGGRLSPYFGINGGF 127


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
 Frame = -3

Query: 573 DPRPSCATLHALRVRPLMSEWK**RMPLKISGTAPVCVH*IS--RASLMAAPSLGSS-TP 403
           DP  S   LH L+ +     +     P+ I     +  H +S  R   ++   LG   T 
Sbjct: 356 DPLASKYELHGLKFQWTDGIFGMALSPVDIHDDRTLFFHPMSSFREFAVSTSILGDKKTA 415

Query: 402 SVHFDRFFLFGRPPSRNRFKSSGRIPSDTALIFSKATIAD 283
             + D F   GRP +++   SSG +     ++F      D
Sbjct: 416 EENTDYFMPIGRPRAKDYGHSSGSVIDRNGVMFFNMVTRD 455


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 528 VLPSKHAVWHSLALGHSYSRA 590
           V+PS  + W+ LA+   Y+R+
Sbjct: 626 VVPSDESHWNDLAMEFYYNRS 646


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 528 VLPSKHAVWHSLALGHSYSRA 590
           V+PS  + W+ LA+   Y+R+
Sbjct: 664 VVPSDESHWNDLAMEFYYNRS 684


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,159
Number of Sequences: 438
Number of extensions: 4489
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)