Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C07
(863 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK095548-1|BAC04570.1| 153|Homo sapiens protein ( Homo sapiens ... 31 4.1
EF078888-1|ABK41959.1| 355|Homo sapiens Kruppel-like factor 2 (... 31 5.4
BC071983-1|AAH71983.1| 355|Homo sapiens Kruppel-like factor 2 (... 31 5.4
BC035342-1|AAH35342.1| 224|Homo sapiens Similar to Kruppel-like... 31 5.4
AF205849-1|AAF13295.1| 355|Homo sapiens Kruppel-like factor pro... 31 5.4
AF123344-1|AAD25076.1| 355|Homo sapiens Kruppel-like zinc finge... 31 5.4
AB208816-1|BAD92053.1| 784|Homo sapiens calpastatin isoform a v... 31 5.4
BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil do... 30 9.5
BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil do... 30 9.5
BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for IM... 30 9.5
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 30 9.5
AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein pr... 30 9.5
AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alp... 30 9.5
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 30 9.5
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 30 9.5
AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil do... 30 9.5
>AK095548-1|BAC04570.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ38229 fis, clone FCBBF2004256. ).
Length = 153
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 612 FPPGSSLVRSPVPTPAALRDTCPPFSPSGSVALSH 716
FPP S L P A CPP S S SV+ SH
Sbjct: 28 FPPASPLCACECPLSAHPLSLCPPVSLSSSVSPSH 62
>EF078888-1|ABK41959.1| 355|Homo sapiens Kruppel-like factor 2
(lung) protein.
Length = 355
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 579 RNPTGL*RYQAFPPGSSLVRSPVPTPAALRDTCPPFSPSGSVAL 710
R P GL R A P +S +R P P DT PP SP G L
Sbjct: 142 RGPRGLKREGAPGPAASCMRGPGGRPPPPPDT-PPLSPDGPARL 184
>BC071983-1|AAH71983.1| 355|Homo sapiens Kruppel-like factor 2
(lung) protein.
Length = 355
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 579 RNPTGL*RYQAFPPGSSLVRSPVPTPAALRDTCPPFSPSGSVAL 710
R P GL R A P +S +R P P DT PP SP G L
Sbjct: 142 RGPRGLKREGAPGPAASCMRGPGGRPPPPPDT-PPLSPDGPARL 184
>BC035342-1|AAH35342.1| 224|Homo sapiens Similar to Kruppel-like
factor 2 (lung) protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 579 RNPTGL*RYQAFPPGSSLVRSPVPTPAALRDTCPPFSPSGSVAL 710
R P GL R A P +S +R P P DT PP SP G L
Sbjct: 142 RGPRGLKREGAPGPAASCMRGPGGRPPPPPDT-PPLSPDGPARL 184
>AF205849-1|AAF13295.1| 355|Homo sapiens Kruppel-like factor
protein.
Length = 355
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 579 RNPTGL*RYQAFPPGSSLVRSPVPTPAALRDTCPPFSPSGSVAL 710
R P GL R A P +S +R P P DT PP SP G L
Sbjct: 142 RGPRGLKREGAPGPAASCMRGPGGRPPPPPDT-PPLSPDGPARL 184
>AF123344-1|AAD25076.1| 355|Homo sapiens Kruppel-like zinc finger
transcription factor protein.
Length = 355
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 579 RNPTGL*RYQAFPPGSSLVRSPVPTPAALRDTCPPFSPSGSVAL 710
R P GL R A P +S +R P P DT PP SP G L
Sbjct: 142 RGPRGLKREGAPGPAASCMRGPGGRPPPPPDT-PPLSPDGPARL 184
>AB208816-1|BAD92053.1| 784|Homo sapiens calpastatin isoform a
variant protein.
Length = 784
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 736 RYLQREL*ESATLPEGEKGGQVSRKAAGVGTGERTRELPGGNA 608
R++ + ES + P GEK G +KAA +G+ + +R GG A
Sbjct: 31 RHVSEKTSESPSKP-GEKKGSDEKKAASLGSSQSSRTYAGGTA 72
>BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -3
Query: 762 WSERXTPN*DTYSVSYEKAPRFPKGRKADRYPVKRQGSEQESARGSFQGETPGIFIVL 589
W P ++SV +++A P + P R S +E+ +G + TPGI++++
Sbjct: 1390 WVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRTPGIYMLI 1447
>BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -3
Query: 762 WSERXTPN*DTYSVSYEKAPRFPKGRKADRYPVKRQGSEQESARGSFQGETPGIFIVL 589
W P ++SV +++A P + P R S +E+ +G + TPGI++++
Sbjct: 1390 WVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRTPGIYMLI 1447
>BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for
IMAGE:5480483) protein.
Length = 466
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 615 PPGSSLVRSPVPTPAALRDTCPP 683
PP ++L SP PTP + R T PP
Sbjct: 245 PPFTALSSSPAPTPGSTRSTRPP 267
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 615 PPGSSLVRSPVPTPAALRDTCPP 683
PP ++L SP PTP + R T PP
Sbjct: 482 PPFTALSSSPAPTPGSTRSTRPP 504
>AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein
protein.
Length = 878
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -3
Query: 762 WSERXTPN*DTYSVSYEKAPRFPKGRKADRYPVKRQGSEQESARGSFQGETPGIFIVL 589
W P ++SV +++A P + P R S +E+ +G + TPGI++++
Sbjct: 790 WVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRTPGIYMLI 847
>AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 714
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 615 PPGSSLVRSPVPTPAALRDTCPP 683
PP ++L SP PTP + R T PP
Sbjct: 429 PPFTALSSSPAPTPGSTRSTRPP 451
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 615 PPGSSLVRSPVPTPAALRDTCPP 683
PP ++L SP PTP + R T PP
Sbjct: 482 PPFTALSSSPAPTPGSTRSTRPP 504
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 615 PPGSSLVRSPVPTPAALRDTCPP 683
PP ++L SP PTP + R T PP
Sbjct: 482 PPFTALSSSPAPTPGSTRSTRPP 504
>AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -3
Query: 762 WSERXTPN*DTYSVSYEKAPRFPKGRKADRYPVKRQGSEQESARGSFQGETPGIFIVL 589
W P ++SV +++A P + P R S +E+ +G + TPGI++++
Sbjct: 1390 WVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRTPGIYMLI 1447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,404,238
Number of Sequences: 237096
Number of extensions: 2478455
Number of successful extensions: 7861
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7849
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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