Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C07
         (863 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    32   1.2  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    31   1.5  
AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-P...    30   3.6  
AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-P...    30   3.6  
X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral n...    29   6.2  
U29608-1|AAA70336.1| 1099|Drosophila melanogaster LATS protein.        29   6.2  
L39837-1|AAA73959.1| 1099|Drosophila melanogaster tumor suppress...    29   6.2  
BT004830-1|AAO45186.1|  821|Drosophila melanogaster SD19495p pro...    29   6.2  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.3  
AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-P...    29   8.3  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.3  

>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 23/76 (30%), Positives = 32/76 (42%)
 Frame = +3

Query: 462  EQKASKRPGTVKRPRCWRFSIGSAPLNEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRS 641
            +++  K P T  +PRC+  S    P  E  K   S    R P    +   +P GS+  R 
Sbjct: 1084 DRRCPKEPVTTPKPRCYPGS----PNPECQKATYSPPTTRTPVTTSKPNCYP-GSTDSRC 1138

Query: 642  PVPTPAALRDTCPPFS 689
            P   P  L+  C P S
Sbjct: 1139 PQKPPTTLKPKCSPGS 1154


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 615 PPGSSLVRSPVPTPAALRDTCPPFSPSGS 701
           PP  +L+ +P  TPA  R   P F+PSGS
Sbjct: 238 PPKPALIFNPDTTPALPRQKFPSFNPSGS 266


>AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-PH,
           isoform H protein.
          Length = 1704

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 609 AFPPGSSLVRSPVPTPAALRDTCPPFSPS 695
           + P     VRSP+ +P A+R + PP  PS
Sbjct: 574 SIPESKCAVRSPISSPLAIRKSRPPLLPS 602


>AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-PD,
           isoform D protein.
          Length = 2063

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 609 AFPPGSSLVRSPVPTPAALRDTCPPFSPS 695
           + P     VRSP+ +P A+R + PP  PS
Sbjct: 592 SIPESKCAVRSPISSPLAIRKSRPPLLPS 620


>X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral
           nervous system defective)protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +3

Query: 528 SAPLNEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAALRDTCPPFSPSGSVA 707
           + P N    +  + ++ R PTG   +  FP   S+    +P+ AA+     PF P   + 
Sbjct: 102 TVPTNTSSSSGLAPEQLRIPTGAAAFSGFPGLHSMSSLMLPSSAAVARAAAPFLPWSPIL 161

Query: 708 L 710
           L
Sbjct: 162 L 162


>U29608-1|AAA70336.1| 1099|Drosophila melanogaster LATS protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +3

Query: 540 NEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTP----AALRDTCPPFSPSGSVA 707
           + HH ++ SS+   NP G   +   P G S V  P P P    A+   T PP  P  S A
Sbjct: 162 HSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAPPPRNPTASSAATPPPPVPPTSQA 221


>L39837-1|AAA73959.1| 1099|Drosophila melanogaster tumor suppressor
           protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +3

Query: 540 NEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTP----AALRDTCPPFSPSGSVA 707
           + HH ++ SS+   NP G   +   P G S V  P P P    A+   T PP  P  S A
Sbjct: 162 HSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAPPPRNPTASSAATPPPPVPPTSQA 221


>BT004830-1|AAO45186.1|  821|Drosophila melanogaster SD19495p
           protein.
          Length = 821

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +3

Query: 540 NEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTP----AALRDTCPPFSPSGSVA 707
           + HH ++ SS+   NP G   +   P G S V  P P P    A+   T PP  P  S A
Sbjct: 162 HSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAPPPRNPTASSAATPPPPVPPTSQA 221


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 291 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 386
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-PA
           protein.
          Length = 1105

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +3

Query: 540 NEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTP----AALRDTCPPFSPSGSVA 707
           + HH ++ SS+   NP G   +   P G S V  P P P    A    T PP  P  S A
Sbjct: 162 HSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAPPPRNPTACSAATPPPPVPPTSQA 221


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 291 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 386
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,367,835
Number of Sequences: 53049
Number of extensions: 729952
Number of successful extensions: 2384
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2381
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)