Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C06
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 89 3e-18
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 89 3e-18
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 83 4e-16
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 70 2e-12
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 1.1
AF099925-4|AAR12970.2| 273|Caenorhabditis elegans Hypothetical ... 31 1.5
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 3.5
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 3.5
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 3.5
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL023835-9|CAA19493.2| 397|Caenorhabditis elegans Hypothetical ... 29 4.6
U40941-4|AAA81709.1| 771|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 89.4 bits (212), Expect = 3e-18
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 538
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 539 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLG-VFRPLPHPQSDVVEGRQ 715
+D+G V+R+ELFI K+W+TFH I L+DL L V L H EG +
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 716 QF 721
F
Sbjct: 122 LF 123
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 660 LEFFDLFLIHNPMSLKEGNSSIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSN 836
L + DL LIH P EG P + ++YS+ DY++ W E G +SIG+SN
Sbjct: 102 LSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSN 161
Query: 837 FNSTQIRKFWTKAK 878
F +QI++ W A+
Sbjct: 162 FTHSQIQRVWDAAE 175
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 89.4 bits (212), Expect = 3e-18
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 538
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 539 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLG-VFRPLPHPQSDVVEGRQ 715
+D+G V+R+ELFI K+W+TFH I L+DL L V L H EG +
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 716 QF 721
F
Sbjct: 122 LF 123
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 660 LEFFDLFLIHNPMSLKEGNSSIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSN 836
L + DL LIH P EG P + ++YS+ DY++ W E G +SIG+SN
Sbjct: 102 LSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSN 161
Query: 837 FNSTQIRKFWTKAK 878
F +QI++ W A+
Sbjct: 162 FTHSQIQRVWDAAE 175
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 82.6 bits (195), Expect = 4e-16
Identities = 45/100 (45%), Positives = 59/100 (59%)
Frame = +2
Query: 362 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 541
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 542 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGL 661
+++G V+R+ELFI K W+ +E R SL L L
Sbjct: 66 LEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQL 105
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +3
Query: 660 LEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 839
LE+ DL+L H P + + S I+S ++ D W + + GLAK++GVSN+
Sbjct: 105 LEYVDLYLAHMPAAFNDDMSE--HIASPVE-------DVWRQFDAVYKAGLAKAVGVSNW 155
Query: 840 NSTQIRK 860
N+ QI +
Sbjct: 156 NNDQISR 162
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +2
Query: 365 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 544
T+ L G MPVI GT LP L E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 545 DDGTVRRDELFIMGKLWSTFH 607
VRR+ELF+ K+W+T+H
Sbjct: 66 KIRKVRREELFLSSKIWNTYH 86
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = +3
Query: 666 FFDLFLIHNPMSLKE----GNSSI-PK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIG 827
+ DL +IH P E G + P+ + ++YS+ DY++ W +ED G +SIG
Sbjct: 106 YMDLIVIHWPFGWAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIG 165
Query: 828 VSNFNSTQIRKFWTK 872
++NFN Q+ + WTK
Sbjct: 166 LANFNIGQVEQVWTK 180
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 64.1 bits (149), Expect = 1e-10
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 535
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 536 NKIDDGTVRRDELFIMGKLWSTFHRTD----LVET---ACRISLADLGLGVFRPLP--HP 688
I G ++R+++F+ KL T H + VE+ A ++ DL L + P P H
Sbjct: 63 EYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYL-IHCPFPFKHQ 121
Query: 689 Q---SDVVEGRQQFYTEDIISDPILGVRLHGRLVRHGRPRSERLGQEHRGQQLQFDPDQK 859
+ + ++E + TE D R +L + G+ ++ LG + + Q
Sbjct: 122 EGSFAPLMENGELAVTEIAHIDT---WRALEKLYKEGKLKA--LGVSN----FSCNQLQA 172
Query: 860 ILDKGKVKPAVNQVEC 907
+ D +VKPA QVEC
Sbjct: 173 LYDAAEVKPANQQVEC 188
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 660 LEFFDLFLIHNPMSLKEGNSSIPKI--SSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVS 833
LE+ DL+LIH P K S + + + +E ++D W +E L +G K++GVS
Sbjct: 104 LEYIDLYLIHCPFPFKHQEGSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVS 163
Query: 834 NFNSTQIRKFWTKAK 878
NF+ Q++ + A+
Sbjct: 164 NFSCNQLQALYDAAE 178
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/102 (36%), Positives = 53/102 (51%)
Frame = +2
Query: 356 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 535
+V L +G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 536 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGL 661
+G ++R+++FI K + D+VE A R SL L L
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRL 105
Score = 44.8 bits (101), Expect = 9e-05
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = +3
Query: 660 LEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 839
L++ DL+L H P S K+ S S+ D W G E + GL K+IGVSNF
Sbjct: 105 LDYVDLYLAHIPASTKDDGSF---------RSDVKVEDIWRGFEKVYGLGLTKAIGVSNF 155
Query: 840 NSTQI 854
N +QI
Sbjct: 156 NESQI 160
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 62.1 bits (144), Expect = 5e-10
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 260 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 436
G+ G+ +D+ + + L ++ LK S + + L L + MP + LGT
Sbjct: 12 GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70
Query: 437 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 616
V+ A+ GY IDTA Y NE+ IG AIK I +G V+R++LFI K+ + F
Sbjct: 71 VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLR 130
Query: 617 LV 622
LV
Sbjct: 131 LV 132
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +2
Query: 365 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 544
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 545 DDGTVRRDELFIMGKL 592
++R+++FI K+
Sbjct: 62 PKHNLKREDIFITTKM 77
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 52.0 bits (119), Expect = 6e-07
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +2
Query: 371 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 547
K DG MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 548 DGTVRRDELFIMGKLWSTFHRTDLVETACRI--SLADL 655
+ R+++FI K+ T + + ET ++ SLA L
Sbjct: 73 QFGLTREDVFITTKV-RTLNENTVEETEKQLANSLATL 109
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 663 EFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFN 842
++ DL LIH P GN +I+ + W +E G +SIGVSN+
Sbjct: 112 DYVDLLLIHYPRDRDTGNDDDYEINKSRRKI------VWQTLEKAKESGRVRSIGVSNYE 165
Query: 843 STQIRKFWTKAK 878
+ + + AK
Sbjct: 166 VYHLVEMFEYAK 177
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 359 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 538
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 539 KIDDGTVRRDELFIMGKLW 595
+V R+E+F+ KLW
Sbjct: 62 ----CSVPREEMFLSTKLW 76
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = +2
Query: 371 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 550
KL++G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 551 GTVRRDELFIMGKLW 595
+ +++++ K++
Sbjct: 63 HNICSEDIYLTSKVF 77
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 663 EFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFN 842
++ DL L+H P L + + + ++ D W +E L A+G +SIGVSN+
Sbjct: 102 KYLDLVLVHYPRPLDTEDLN--------ENNKMYRKDTWIALEKLHAEGKIRSIGVSNYE 153
Query: 843 STQIRK 860
I +
Sbjct: 154 PHHIEE 159
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 392 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 568
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 569 ELFIMGKL 592
+++I KL
Sbjct: 71 DIWITSKL 78
Score = 34.7 bits (76), Expect = 0.092
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 660 LEFFDLFLIHNP-MSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSN 836
+E+ DL LIH P SLK N + K+ +++W M +++A+G +S+GVSN
Sbjct: 101 VEYLDLLLIHWPGSSLKSENPANKKLR----------VESWNVMCEMMAEGKLRSVGVSN 150
Query: 837 FNSTQIRKFWTKAKSSLPSI 896
F + + K + +P++
Sbjct: 151 FEICHLEEL-KKDSNVVPAV 169
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = +2
Query: 371 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 550
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 551 GTVRRDELFIMGKLWSTFHRTDLVETACR 637
+ R ++F+ K F + ACR
Sbjct: 74 HGLSRSDVFLTSKF---FPESKNCREACR 99
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +3
Query: 648 QTWGLEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIG 827
Q+ ++ D++L+H P K +S +++ +Y + Y +E+ A G +SIG
Sbjct: 107 QSLQTDYIDMYLVHYP---KPNDSDNDDVNNA-EYRKIAYEV----LEEAKAAGKVRSIG 158
Query: 828 VSNFNSTQIRKFWTKAK 878
VSN+ + + T AK
Sbjct: 159 VSNYEIVHLEELKTYAK 175
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 660 LEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 839
LE+ DL+L H P + + S KI S ++ D W + + GLAK++GVSN+
Sbjct: 75 LEYVDLYLAHMPTAFSDDMSQ--KIESSVE-------DIWRQFDAVYKAGLAKAVGVSNW 125
Query: 840 NSTQIR 857
N+ QIR
Sbjct: 126 NNDQIR 131
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 443 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 532
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>AF099925-4|AAR12970.2| 273|Caenorhabditis elegans Hypothetical
protein K01A2.4 protein.
Length = 273
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 675 GRKTPSPRSASEILQAVSTRSVRWNVLHNLP--IMKSSSRLTVPSSILFLIAFPMSFSL 505
GR T + SASE +QA + + +NLP + +L + I FLI M+++L
Sbjct: 101 GRHTSNGHSASETVQASNGEKEHAKMQYNLPPDVKDKKKKLLIGHGISFLIHVIMTYTL 159
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 729 KISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIRKFWTKAK 878
K ++ + S+ + MD + L ++ L K V NST +R FW K K
Sbjct: 627 KPAAQVALSDKNKMDMAIAEKRLTSEQLIKLEEVKTINSTAVRLFWKKRK 676
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 729 KISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIRKFWTKAK 878
K ++ + S+ + MD + L ++ L K V NST +R FW K K
Sbjct: 627 KPAAQVALSDKNKMDMAIAEKRLTSEQLIKLEEVKTINSTAVRLFWKKRK 676
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 729 KISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIRKFWTKAK 878
K ++ + S+ + MD + L ++ L K V NST +R FW K K
Sbjct: 627 KPAAQVALSDKNKMDMAIAEKRLTSEQLIKLEEVKTINSTAVRLFWKKRK 676
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 613 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 440
G QFT + + GA+ +VL + L +S +++++AH+ SS FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
>AL023835-9|CAA19493.2| 397|Caenorhabditis elegans Hypothetical
protein Y37A1B.10 protein.
Length = 397
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 49 CLYSPSRRREKTPSFRKSKILD--IFLIFVLEIFSKIKQNEDNLVH 180
CL+ SR R+K S K+ D + ++ ++ IFS I ++ ++H
Sbjct: 262 CLHEASRARQKLNSPHKNASNDKSVKMVAIMTIFSMIAESPSGIIH 307
>U40941-4|AAA81709.1| 771|Caenorhabditis elegans Hypothetical
protein F35C8.7a protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 704 QRHRIVDEEEVEKLQAPGLPVKSCRPSPPDRCDGMY 597
++HR + EV + ++ G P+ + P P R DG+Y
Sbjct: 4 KKHRTIPAVEVYE-KSDGFPMPTAPPMSPSRMDGVY 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,415,933
Number of Sequences: 27780
Number of extensions: 442499
Number of successful extensions: 1560
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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