Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_C02
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 64 2e-11
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 61 2e-10
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 58 2e-09
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 54 3e-08
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 48 1e-06
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 40 6e-04
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 38 0.002
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 36 0.006
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 34 0.030
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 32 0.092
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 31 0.21
SPAC105.02c |||ankyrin repeat protein, unknown biological role|S... 30 0.49
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 28 1.5
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 28 2.0
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 28 2.0
SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomy... 27 2.6
SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|... 27 3.5
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 27 4.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 4.6
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 6.0
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 6.0
SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces pom... 26 8.0
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 8.0
SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomy... 26 8.0
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 64.1 bits (149), Expect = 2e-11
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +1
Query: 382 PEPLFRARDDGGLQPLHNACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDV 561
PE L R +D G PLH A + G VV+ L++ AP D++G+TPLH A A+G DV
Sbjct: 131 PE-LIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDV 189
Query: 562 CIALLQHGADPNIRNTEGKTPLDL 633
+ L++ GAD +++E T L++
Sbjct: 190 GVELVRAGADTLRKDSENHTALEV 213
Score = 48.8 bits (111), Expect = 1e-06
Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +1
Query: 412 GGLQPLHNACSFGHADVVRALLTAGAPPAAR--DNWGYTPLHEAAAKGKVDVCIALLQHG 585
GG LH A G +V+ LL AP R D G TPLH AAA GK+ V L+
Sbjct: 106 GGQTCLHYAAGKGRLSIVQ-LLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQR 164
Query: 586 ADPNIRNTEGKTPLDLADSSTRPVLTGEHCAAEVXEAARSGSEDRLAALLTP 741
A N ++ G TPL A + P + G + R SE+ A + P
Sbjct: 165 APLNTSDSYGFTPLHFALAEGHPDV-GVELVRAGADTLRKDSENHTALEVCP 215
Score = 34.3 bits (75), Expect = 0.023
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 400 ARDDGGLQPLHNACSFGHADVVRALL-TAGAPPAARDNWGYTPLHEAAAKGKV--DVCIA 570
A DD PLH ACS G + + LL P +D G+TPL + V +V
Sbjct: 32 AVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPLMISINNRSVPDNVIEE 91
Query: 571 LLQHG-ADPNIRNTEGKTPLDLADSSTR 651
L+ DP I G+T L A R
Sbjct: 92 LINRSDVDPTITTRGGQTCLHYAAGKGR 119
Score = 31.1 bits (67), Expect = 0.21
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 225 LFEACKIGDAARVKKLVTPQT-VNARDTAGRKSTPLHFAAGYGRREIVEILIAAGA 389
L A +G VK L++ + +N D+ G TPLHFA G ++ L+ AGA
Sbjct: 145 LHRAAAVGKIQVVKYLISQRAPLNTSDSYG--FTPLHFALAEGHPDVGVELVRAGA 198
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 261 VKKLVTPQTVNARDTAGRKSTPLHFAAGYGRREIVEIL 374
+++L+ V+ T T LH+AAG GR IV++L
Sbjct: 89 IEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLL 126
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 60.9 bits (141), Expect = 2e-10
Identities = 35/115 (30%), Positives = 55/115 (47%)
Frame = +1
Query: 394 FRARDDGGLQPLHNACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDVCIAL 573
F ++ G LH + G ++ L AG RD GYTPLH A+ D+C+ L
Sbjct: 855 FSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNL 914
Query: 574 LQHGADPNIRNTEGKTPLDLADSSTRPVLTGEHCAAEVXEAARSGSEDRLAALLT 738
L +GA P++ GK P+DL+ S ++ E + +RS +D ++ T
Sbjct: 915 LSNGAKPDVIGASGKKPIDLSSSEPIKLVFKEANNEQAQSISRSLIKDSEGSINT 969
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 288 VNARDTAGRKSTPLHFAAGYGRREIVEILIAAGA 389
VN RD G TPLH+A+ Y ++I L++ GA
Sbjct: 888 VNKRDALGY--TPLHYASLYDHKDICVNLLSNGA 919
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 58.0 bits (134), Expect = 2e-09
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 436 ACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDVCIALLQHGADPNIRNTEG 615
A S G DVV L +G P A D GYTP+H A + G D+ L++ G D NIR+ +G
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
Query: 616 KTPL 627
+TPL
Sbjct: 71 ETPL 74
Score = 48.4 bits (110), Expect = 1e-06
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 400 ARDDGGLQPLHNACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDVCIALL- 576
A D+ G P+H A S+GH+D+++ L+ G RD G TPL K+++ L+
Sbjct: 32 AADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPLFVCE---KLEIAHDLIN 88
Query: 577 QHGADPNIRNTEG 615
Q+ AD ++N +G
Sbjct: 89 QYNADTTVKNNDG 101
Score = 30.7 bits (66), Expect = 0.28
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 535 AAAKGKVDVCIALLQHGADPNIRNTEGKTPLDLADS 642
AA+ GK DV + L G PN + G TP+ A S
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVS 46
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 261 VKKLVTPQTVNARDTAGRKSTPLHFAAGYGRREIVEILIAAG 386
+K L + + NA D G TP+H A YG ++++IL+ G
Sbjct: 21 LKHLDSGISPNAADENGY--TPIHAAVSYGHSDLLKILVERG 60
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 53.6 bits (123), Expect = 3e-08
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = +1
Query: 382 PEPLFRARDDGGLQPLHNACSFGHADVVRALLTAGAPPA--ARDNWGYTPLHEAAAKGKV 555
P+ L R RD+ G LH A + GH VV+ ++ A++ G T +H AA G
Sbjct: 26 PQELSR-RDENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHA 84
Query: 556 DVCIALLQHGADPNIRNTEGKTPLDLADSSTRPVLTGEHCAAEVXEAA--RSGSEDRL 723
++C LL+ G DP+I+N K+P+ AD + + E+ + + +G E++L
Sbjct: 85 EICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQKVMDLFLDFEIAKGSEENTGDEEKL 142
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 48.4 bits (110), Expect = 1e-06
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 400 ARDDGGLQPLHNACSFGHADVVRALLTAGAPP-AARDNWGYTPLHEAAAKGKVDVCIALL 576
A D+GG LH A + + LL GA A + P+H AA +G V L+
Sbjct: 29 ATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGGDLQAAPIHWAAKRGSVKTVHYLV 88
Query: 577 QHGADPNIRNTEGKTPLDLADSSTRPVL 660
QHGADP +++ +G L LA + P+L
Sbjct: 89 QHGADPLLKDKQGFNCLHLAVHAASPLL 116
Score = 32.3 bits (70), Expect = 0.092
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 403 RDDGGLQPLHNACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDVCIALLQH 582
RDD PL A G+ + LL GA A D TPLH + G + +L+
Sbjct: 130 RDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKE 189
Query: 583 GADP 594
G P
Sbjct: 190 GGIP 193
Score = 29.9 bits (64), Expect = 0.49
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +1
Query: 403 RDDGGLQPLHNACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDVCIALLQH 582
+D G LH A +V LL RD+ +TPL A+ G + LL+
Sbjct: 97 KDKQGFNCLHLAVHAASPLLVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRW 156
Query: 583 GADPNIRNTEGKTPL 627
GAD + + TPL
Sbjct: 157 GADVLATDEDKMTPL 171
Score = 29.1 bits (62), Expect = 0.86
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 694 AARSGSEDRLAALLTPLNVNVHAGDGRGSTRLHXAAGYNXXXXXXXXXQRGAD 852
AA G D + L++ ++V+A D G+T LH AA + GAD
Sbjct: 7 AASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGAD 59
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 427 LHNACSFGHADVVRALLTAGAPPAARDNW-GYTPLHEAAAKGKVDVCIALLQHGADPNIR 603
LH A + + V+ LL GA P+ARD +TPL A+A G ++ L+ GA +
Sbjct: 371 LHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLASATGLSEIVSILVASGASVDEV 430
Query: 604 NTEGKTPLDLA 636
++ G T ++ A
Sbjct: 431 DSSGWTAMEQA 441
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 213 PLRELFEACKIGDAARVKKLVTPQTVNARDTAGRKSTPLHFAAGYGRREIVEILIAAGA 389
P+ L C +GD + + + N + +T LH A Y R E V++L+ GA
Sbjct: 333 PVPPLVLTCCVGDYDLIVEELILAGFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGA 391
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 321 TPLHFAAGYGRREIVEILIAAGAAL 395
TPL A+ G EIV IL+A+GA++
Sbjct: 403 TPLMLASATGLSEIVSILVASGASV 427
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 520 TPLHEAAAKGKVDVCIALLQHGADPNIRNTEGKTPLDLA 636
TPLH A + + LL++GADP + N GKTP +++
Sbjct: 435 TPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEIS 473
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 424 PLHNACSFGHADVVRALLTAGAPPAARDNWGYTPLHEAAAKGKVDVCIALLQH 582
PLH A + +A +V LL GA PA + G TP + +V + +H
Sbjct: 436 PLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGNKEVKDEFLIARH 488
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 382 PEPLFRAR---DDGGLQPLHNACSFGHADVVRALLTAGAPPAARDNWGYTPL 528
P P F+ DD G LH ACS GH ++++ LL A A + TPL
Sbjct: 234 PPPDFQVNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 505 DNWGYTPLHEAAAKGKVDVCIALLQHGADPNIRNTEGKTPL 627
D+ G+T LH A + G +++ LL+ AD + N +TPL
Sbjct: 245 DDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 33.9 bits (74), Expect = 0.030
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 225 LFEACKIGDAARVKKLVTPQTVNARDTAGRKSTPLHFAAGYGRREIVEILI 377
LF + + + VK +++ V+ K+TPLH AA GR++IVE L+
Sbjct: 59 LFISIQCANVQMVKHILSVFDVDVNAYDKNKNTPLHLAAMAGRQDIVEALL 109
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 GYTPLHEAAAKGKVDVCIALLQHGADPNIRNTEGKTPLDLA-DSSTRPVL 660
G T LH A ++ LL +GADP R+ GK P D D + R +L
Sbjct: 189 GQTYLHVATKAKDAELVKWLLDNGADPYRRDKFGKLPTDYTKDENMRSLL 238
Score = 29.1 bits (62), Expect = 0.86
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 520 TPLHEAAAKGKVDVCIALLQH-GADPNIRNTEGKTPLDLADS 642
TPLH AA G+ D+ ALL H + N+ N K +A S
Sbjct: 91 TPLHLAAMAGRQDIVEALLLHPDINYNLVNANNKKAYQVATS 132
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 32.3 bits (70), Expect = 0.092
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 505 DNWGYTPLHEAAAKGKVDVCIALLQHGADPNIRNTEGKTPL 627
D G+ LH AAA K+ + AL+ GA+P N G+T L
Sbjct: 354 DELGHAALHWAAAVAKMPLLQALIHKGANPLRGNLTGETAL 394
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 288 VNARDTAGRKSTPLHFAAGYGRREIVEILIAAGAA 392
+N +D G T L+ AA G + IVE+L+ AGA+
Sbjct: 477 LNHQDKNG--DTALNIAARIGNKNIVEVLMQAGAS 509
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 496 AARDNWGYTPLHEAAAKGKVDVCIALLQHGAD 591
A D G+T LH AAA G +++ ALLQ GA+
Sbjct: 231 AGIDEDGHTALHWAAAMGNLEMMHALLQAGAN 262
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 406 DDGGLQPLHNACSFGHADVVRALLTAGA 489
D+ G LH A + G+ +++ ALL AGA
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGA 261
>SPAC105.02c |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 29.9 bits (64), Expect = 0.49
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +1
Query: 400 ARDDGGLQPLHNACSFGHADVVRALLT-AGAPPAARDNW-GYTPLHEAAAKGKVDVCIAL 573
ARD G +H +G + + LL +G R G TPLH A K D AL
Sbjct: 42 ARDSLGNDCVHVCTKYGSLECLDWLLDISGVNLNNRCRMTGDTPLHFAVMFIKKDQETAL 101
Query: 574 ------LQHGADPNIRNTEGKTPLDL 633
++ GADP + N +G P+DL
Sbjct: 102 RMVEMLMEVGADPLLTNNDGFRPIDL 127
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +1
Query: 331 ISLQVTDAEK*WRYSSLPEPLFRARDDGGLQPLHNACSFGHADVVRA----LLTAGAPPA 498
+S ++TD R+SS+ EP+ + + G + NA VV+A L +G
Sbjct: 275 LSAEITDIRD--RFSSILEPMLQKLNKGNYYRIQNAKDITSFTVVQAKQAFLAMSGQNFP 332
Query: 499 ARDNWGYTPLHEAAAKGKVDVCIALLQHGADP 594
A W +A A + + LL HG P
Sbjct: 333 ANQKWDILNTFDALATFAYPLNL-LLNHGIRP 363
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 494 RPPETTGGTRPSTR-RLQKEKSTFA*LSSSTAPIRTSGTPRVRRP-SIWRTLPPG 652
RPP T TRP +R + + + S+S + ++ + + ++ RP S +T+ PG
Sbjct: 238 RPPTRTSTTRPLSRVNVTNASGSISKNSTSPSKVKVNASTKIVRPVSAAQTVRPG 292
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 403 RDDGGLQPLHNACSFGHADVVRALLT-AGAPPAARDNW-GYTPLHEAAAKGKVDVCIALL 576
+D G LH A S VR+LL G +D GYT LH A G ++ LL
Sbjct: 48 KDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLL 107
Query: 577 QHGADPNIRN 606
DP+ R+
Sbjct: 108 --SKDPSFRS 115
>SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 322 VDLRPAVSLAFTVCGVTSFFTRAASPILQASNNSLRGSVGAGRASNAEPSIERRLDML 149
V+ RP A VT+F P+L A+ +R + G A+NA + E+ L ML
Sbjct: 670 VNARPDKVYAGKPVYVTAFRQLVNDPVLSANMQLVRCNALIGMANNAIKNDEQELQML 727
>SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|chr
2|||Manual
Length = 403
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 250 SPILQASNNSLRGSVGAGRASNAEP-SIERRLDMLLYGFTFNIYKNNGCICTFSRFFSHK 74
S +L +S S +V + A+P S+E ++ +L N + N C F RFF +K
Sbjct: 129 SSLLLSSGISPNATVSNAQYGPAQPPSVEEQVQKIL-----NAWNLNHPDCAFQRFFYNK 183
Query: 73 TRTDTAA 53
+ AA
Sbjct: 184 VPVEQAA 190
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 443 EHALCNGCSPPSSLALKS 390
++AL N C PPSS++L S
Sbjct: 1507 QYALLNWCQPPSSISLAS 1524
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 105 FVHFRDFFHTKHVLIQLLDCPKILR 31
F HF+ F +TK L QL DC +L+
Sbjct: 1373 FQHFKLFTNTKQSLNQLKDCTLLLQ 1397
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 6.0
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Frame = -3
Query: 692 SXTSAAQCSPVSTGLVEESARSRGVLPSVFLMFGSAPCW-RRAMQTSTFPFAAASWRGVY 516
S SA+ P +T + G P+ +L S P +RA + + ++AS +
Sbjct: 19 SGVSASLSDPANTPTILADDIVHGYTPATYL--SSVPTLLKRATTSYNYNTSSASSSSLT 76
Query: 515 PQL----SLAAGGAPAVSRA-LTTSA*PNEHALCNGCSPPSSLALKSGSGSDEYLHYFSA 351
SL + + A S TTSA P +L + + SSLA S + S S+
Sbjct: 77 SSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSS----LASS 132
Query: 350 SVTCSEM*GR*FTSS 306
S+T S + TSS
Sbjct: 133 SITSSSLASSSITSS 147
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 437 HARSVTLTSSGPCLQLELHRPPETTGGTRPSTRRLQKEKS 556
H RS+TL SS LEL + RPS R ++S
Sbjct: 41 HRRSLTLLSSFTSSMLELPNNGKEENHRRPSVARSSSDRS 80
>SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 453
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = -1
Query: 316 LRPAVSLAFTVCGVTSFFTRAASPILQASNNSLRGSVGAGRASNAEPSIERRLDMLLYGF 137
L +V + ++V G F +P+++A+N S G + R L
Sbjct: 94 LNGSVPIDYSVSGNPLSFVPTWTPVIEAANADALSSSGRVELFDMGRQFYERYHELFNAS 153
Query: 136 TFNIY 122
T+NIY
Sbjct: 154 TYNIY 158
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 572 RAMQTSTFPFAAASWRGVYPQLSLAAGG--APAVSRALTTSA*PNE 441
R ++ P +S R +Y + GG APA+SRA +T+ P+E
Sbjct: 128 RMARSQELPRITSSNREIYLNGQTSDGGYAAPAISRAESTAIQPSE 173
>SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 532 EAAAKGKVDVCIALLQHGADPNIRNTEG 615
EA AK V + QHG + +N+EG
Sbjct: 298 EACAKATVAASFVIQQHGLPAHTKNSEG 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,462,228
Number of Sequences: 5004
Number of extensions: 75019
Number of successful extensions: 237
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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