Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C01
         (977 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    33   0.017
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   4.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   6.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 32.7 bits (71), Expect = 0.017
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +2

Query: 605 PXAXGGXPXGXXPGGGXXGPVPPXXXGGGXXGG 703
           P A GG   G  PGGG      P   GGG  GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 29.1 bits (62), Expect = 0.21
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = +2

Query: 557 PXGGGGXXGXGPXXXXPXAXGGXPXGXXPGGGXXG 661
           P  GGG  G G     P   GG   G  PGGG  G
Sbjct: 200 PGAGGGGSGGG----APGGGGGSSGGPGPGGGGGG 230



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = +2

Query: 563 GGGGXXGXGPXXXXPXAXGGXPXGXXPGGGXXGPVPPXXXGGGXXGGAPXP 715
           GGGG  G         A         PG G  G       GGG   G P P
Sbjct: 174 GGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGP 224



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 563 GGGGXXGXGPXXXXPXAXGGXPXGXXPGGG 652
           GGGG  G  P      + G  P G   GGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 591 PGXXXPXPGGGXPXGXXRGGGXXGXSXXGXXXGG 692
           PG      GGG P G   GGG  G    G   GG
Sbjct: 200 PGAGGGGSGGGAPGG---GGGSSGGPGPGGGGGG 230


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 15/51 (29%), Positives = 15/51 (29%)
 Frame = -3

Query: 708 GAPPXXPPPXXXGGTGPXXPPPGXXPXGXPPXAXGXXXXGPXPXXPPPPXG 556
           G PP   PP   GG  P   P      G  P         P P     P G
Sbjct: 261 GQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGG 311



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
 Frame = -1

Query: 929 PXXGXGXXXXXXPXGGGPXPRGGXXPPXPXR-GGAXPPPXXXPPPXXEXAXP 777
           P    G      P   GP   G    P P R GG  P P   P P      P
Sbjct: 183 PGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPP 234



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 12/39 (30%), Positives = 13/39 (33%)
 Frame = -1

Query: 893 PXGGGPXPRGGXXPPXPXRGGAXPPPXXXPPPXXEXAXP 777
           P G  P  + G  P  P   G   PP    PP      P
Sbjct: 233 PPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNP 271



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 632 GXXPGGGXXGPVPPXXXGGGXXGGAP 709
           G  P G    P PP    GG  GG P
Sbjct: 288 GGMPSGMVGPPRPPMPMQGGAPGGPP 313


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = -3

Query: 660 PXXPPPGXXPXGXPPXAX-GXXXXGPXPXXPPPP 562
           P   PP   P G PP    G    GP    PP P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 702 PPXXPPPXXXGGTGPXXPPPGXXP 631
           PP  PPP    G GP   P G  P
Sbjct: 589 PPMGPPPSPLAG-GPLGGPAGSRP 611



 Score = 23.8 bits (49), Expect = 8.0
 Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
 Frame = +1

Query: 706 AXPSXGXXPPPXXXPPPXLXXQXRGXAXSXXGGGXXXG-GGXAPP---RXGXGGXXPP 867
           A P     PPP   PPP           S   GG   G  G  PP     G GG  PP
Sbjct: 579 AQPPPAPPPPPPMGPPP-----------SPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 672  GGTGPXXPPPGXXPXGXP 619
            G  GP  PPP   P G P
Sbjct: 1264 GSMGPHTPPPPNTPNGMP 1281


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
 Frame = -3

Query: 735 GRXGXXRGXGAPPXXPPPXXXGG-TGPXXPPPGXXPXGXPPXAXGXXXXGPXPXXP 571
           GR G  +G   PP  P P    G TG         P G PP A G       P  P
Sbjct: 36  GRTGA-QGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVG-PPGAPGRDGMPGAPGLP 89


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +2

Query: 563 GGGGXXGXGPXXXXPXAXGGXPXGXXPGGGXXG 661
           GGGG  G G         GG       GGG  G
Sbjct: 661 GGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIG 693


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,709
Number of Sequences: 2352
Number of extensions: 11135
Number of successful extensions: 114
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106885740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)