BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_B24
(908 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060901-1|AAL28449.1| 236|Drosophila melanogaster GM05057p pro... 113 2e-25
AE014134-922|AAF52252.1| 236|Drosophila melanogaster CG7382-PA ... 113 2e-25
AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA... 31 1.7
BT006027-1|AAO85561.1| 419|Drosophila melanogaster LD10519p pro... 30 3.8
AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A pro... 30 3.8
AE014135-166|ABC65831.1| 419|Drosophila melanogaster CG11081-PE... 30 3.8
AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD... 30 3.8
AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA... 30 3.8
AY070987-1|AAL48609.1| 252|Drosophila melanogaster RE08075p pro... 30 5.0
AE014297-3562|AAF56308.2| 252|Drosophila melanogaster CG13618-P... 30 5.0
BT024305-1|ABC86367.1| 164|Drosophila melanogaster IP12057p pro... 29 8.8
AE014297-4234|AAF56792.1| 421|Drosophila melanogaster CG1894-PA... 29 8.8
>AY060901-1|AAL28449.1| 236|Drosophila melanogaster GM05057p
protein.
Length = 236
Score = 113 bits (273), Expect = 2e-25
Identities = 49/92 (53%), Positives = 67/92 (72%)
Frame = +1
Query: 436 QDPRVEDALGAPIKGYGEEXXXXXXXHVSHAVYEKDGVKHMRMRFYIKGIRNKGVVELDM 615
+DPRV+DA+GAPIKG+GE HV+H+ YE++G HMRM+FY++G+RNK V+L+
Sbjct: 119 EDPRVQDAIGAPIKGFGETSRRGRRQHVAHSSYERNGKPHMRMQFYVQGLRNKATVQLES 178
Query: 616 KQNDYGNYMCRYLLVQLDDYSGKTFIIEDNRA 711
+++D G RYL VQLD Y T I+EDNRA
Sbjct: 179 RRSDSGKLEYRYLFVQLDHYPRTTIILEDNRA 210
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 288 SEKESGLTKSKSKESASHVSTDVRPLGEKIKETTKTVSY 404
+ ++ G + +S+++ + VSTDVRP+GEKIKE TKT SY
Sbjct: 41 ASRDGGGSLQRSQDN-TQVSTDVRPIGEKIKENTKTASY 78
>AE014134-922|AAF52252.1| 236|Drosophila melanogaster CG7382-PA
protein.
Length = 236
Score = 113 bits (273), Expect = 2e-25
Identities = 49/92 (53%), Positives = 67/92 (72%)
Frame = +1
Query: 436 QDPRVEDALGAPIKGYGEEXXXXXXXHVSHAVYEKDGVKHMRMRFYIKGIRNKGVVELDM 615
+DPRV+DA+GAPIKG+GE HV+H+ YE++G HMRM+FY++G+RNK V+L+
Sbjct: 119 EDPRVQDAIGAPIKGFGETSRRGRRQHVAHSSYERNGKPHMRMQFYVQGLRNKATVQLES 178
Query: 616 KQNDYGNYMCRYLLVQLDDYSGKTFIIEDNRA 711
+++D G RYL VQLD Y T I+EDNRA
Sbjct: 179 RRSDSGKLEYRYLFVQLDHYPRTTIILEDNRA 210
Score = 44.0 bits (99), Expect = 3e-04
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 288 SEKESGLTKSKSKESASHVSTDVRPLGEKIKETTKTVSY 404
+ ++ G + +S+++ + VSTDVRP+GEKIKE TKT SY
Sbjct: 41 ASRDGGGSLQRSQDN-TQVSTDVRPIGEKIKENTKTASY 78
>AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA
protein.
Length = 463
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 204 PLLRNGSTTEKIPAILQTKFRTNTRYFSSEKESG--LTKSKSKESASHVSTDVRP 362
P + ST++K + K + + S+K S +KSK+KESASH DV P
Sbjct: 290 PKKKKSSTSKKDKKSKKKKKKRKSEAEKSKKSSSSSASKSKNKESASHNDEDVGP 344
>BT006027-1|AAO85561.1| 419|Drosophila melanogaster LD10519p
protein.
Length = 419
Score = 30.3 bits (65), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 341 CIYRCKTLRRKNQRNYKNCF 400
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A
protein.
Length = 1945
Score = 30.3 bits (65), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 341 CIYRCKTLRRKNQRNYKNCF 400
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AE014135-166|ABC65831.1| 419|Drosophila melanogaster CG11081-PE,
isoform E protein.
Length = 419
Score = 30.3 bits (65), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 341 CIYRCKTLRRKNQRNYKNCF 400
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD,
isoform D protein.
Length = 1945
Score = 30.3 bits (65), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 341 CIYRCKTLRRKNQRNYKNCF 400
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA,
isoform A protein.
Length = 1945
Score = 30.3 bits (65), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 341 CIYRCKTLRRKNQRNYKNCF 400
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AY070987-1|AAL48609.1| 252|Drosophila melanogaster RE08075p
protein.
Length = 252
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 469 PIKGYGEEXXXXXXXHVSHAV----YEKDGVKHMRMRFY 573
PI G+G+ + H + +EKDGVK+MR++ Y
Sbjct: 142 PITGHGKANVTLINTKIEHRLIGEPFEKDGVKYMRLKDY 180
>AE014297-3562|AAF56308.2| 252|Drosophila melanogaster CG13618-PA
protein.
Length = 252
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 469 PIKGYGEEXXXXXXXHVSHAV----YEKDGVKHMRMRFY 573
PI G+G+ + H + +EKDGVK+MR++ Y
Sbjct: 142 PITGHGKANVTLINTKIEHRLIGEPFEKDGVKYMRLKDY 180
>BT024305-1|ABC86367.1| 164|Drosophila melanogaster IP12057p
protein.
Length = 164
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 195 KFLPLLRNGSTTEKIPAILQTKFRTNTRYFSSEKESGLTKSKSKESASHVSTDVRPLGEK 374
K+ PL + K+P I + TN + S+ + G + SKS+ S + D L +
Sbjct: 12 KYQPLGDQDGISSKLPDIPRALQLTNAKESSATRGLGQSASKSEMGKSQLQND-SSLQKN 70
Query: 375 IKETTKTVS 401
I+E TKT++
Sbjct: 71 IQE-TKTIT 78
>AE014297-4234|AAF56792.1| 421|Drosophila melanogaster CG1894-PA
protein.
Length = 421
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 195 KFLPLLRNGSTTEKIPAILQTKFRTNTRYFSSEKESGLTKSKSKESASHVSTDVRPLGEK 374
K+ PL + K+P I + TN + S+ + G + SKS+ S + D L +
Sbjct: 12 KYQPLGDQDGISSKLPDIPRALQLTNAKESSATRGLGQSASKSEMGKSQLQND-SSLQKN 70
Query: 375 IKETTKTVS 401
I+E TKT++
Sbjct: 71 IQE-TKTIT 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,097,969
Number of Sequences: 53049
Number of extensions: 558577
Number of successful extensions: 1582
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -