Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_B18
(905 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0874 - 21205506-21205685,21205825-21205998,21206114-212062... 93 2e-19
10_08_0879 - 21255033-21255236,21255292-21255465,21255558-212556... 81 9e-16
07_01_0086 + 672173-673603 77 3e-14
07_01_0088 + 684471-685154,685271-685834,685938-686222 74 1e-13
07_01_0085 + 663694-665022 74 2e-13
07_01_0087 + 676501-677907 70 2e-12
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 67 2e-11
06_03_0298 - 19272257-19273714 63 3e-10
01_04_0011 + 15067536-15068236,15068283-15068898 56 4e-08
03_01_0580 + 4293079-4293582,4293797-4294037,4294982-4295160,429... 42 5e-04
06_01_0717 - 5219848-5220178,5220268-5220617,5221807-5221982,522... 34 0.14
11_04_0057 - 12953479-12954364,12954484-12955034,12955125-129553... 33 0.41
03_05_0083 - 20616432-20616469,20616666-20617119 30 2.9
07_03_0972 + 23043034-23043203,23045120-23045600,23045621-230457... 29 5.1
09_06_0182 - 21397221-21397575,21397712-21398076,21398510-213986... 29 6.7
>10_08_0874 -
21205506-21205685,21205825-21205998,21206114-21206249,
21206622-21206794,21207612-21207839
Length = 296
Score = 93.5 bits (222), Expect = 2e-19
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +2
Query: 56 MKSM*CFLCTGYLYDFPFLHESCNISVEDNCVEPLYKHLVNIH-HPTMCFIGVPYYVCAF 232
+ SM L + YLYDFPFL + I+V+DNCV+PLYKH+ P + FIG+P+ V F
Sbjct: 124 LHSMVNALFSCYLYDFPFLEDDSAITVDDNCVDPLYKHVFPPEVAPHLSFIGLPWKVIPF 183
Query: 233 SMFDLQVRYYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAHMMGPDQEKYYAS 412
+F+LQ ++ ++G LPS+EEM+ + +RG+ KR AH Q +Y
Sbjct: 184 PLFELQSKWVAGVLSGRVKLPSSEEMMEDVKAFHSKMEARGWPKRYAHNFSDCQFEYDDW 243
Query: 413 LATEAG 430
LA + G
Sbjct: 244 LAEQCG 249
>10_08_0879 -
21255033-21255236,21255292-21255465,21255558-21255690,
21255769-21255854,21256593-21256742,21256804-21256904,
21257058-21257355
Length = 381
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISVEDNCVEPLYKHLVNIHH-PTMCFIGVPYYVCAFSMFDLQVR 256
CTGY Y FPFL ++V+ N V PLYKH+ H P + F+G+P F F+L+ R
Sbjct: 210 CTGYRYHFPFLDVE-GVTVDGNRVGPLYKHVFPPKHAPNLSFVGLPVKTIMFQSFELESR 268
Query: 257 YYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAHMMGPD 391
+ R+++G LP E M A EE+ + + G KR H + PD
Sbjct: 269 WVARALSGRAELPGEEAMAAAVEEDYRRMDAAGKPKRHTHALMPD 313
>07_01_0086 + 672173-673603
Length = 476
Score = 76.6 bits (180), Expect = 3e-14
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISVEDNCVEPLYKHLVNIH-HPTMCFIGVPYYVCAFSMFDLQVR 256
CTGY Y FPFL + ++V+DN V PLY+H+ P++ F+G+P V ++Q R
Sbjct: 292 CTGYNYSFPFLDTNGKVTVDDNRVGPLYEHVFPPELAPSLSFVGIPAKVLLPVFIEVQAR 351
Query: 257 YYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAHMMGPDQEK 400
+ + ++G +LPS EEM EE + + G KR H M D E+
Sbjct: 352 WVAQVLSGRRTLPSQEEMQRAVEEHSRGMEAAGLPKRWTHDMFLDLER 399
>07_01_0088 + 684471-685154,685271-685834,685938-686222
Length = 510
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISVEDNCVEPLYKHLVN-IHHPTMCFIGVPYYVCAFSMFDLQVR 256
CTGY+Y FPFL ++V+DN V PL++H+ P++ F+GVP V A F+ Q +
Sbjct: 309 CTGYVYSFPFLDTDGVVTVDDNRVGPLFEHVFPPALAPSLSFVGVPRKVPAPWFFEAQGK 368
Query: 257 YYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAHMMGP-DQEKY 403
+ + ++G +LP EEM+ +E + RA+ G + H +G + +KY
Sbjct: 369 WVAQVLSGRRTLPPVEEMLRAVDEHYRARAAAGVPVKYTHELGGIEPQKY 418
>07_01_0085 + 663694-665022
Length = 442
Score = 73.7 bits (173), Expect = 2e-13
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISVEDNCVEPLYKHLVNIH-HPTMCFIGVPYYVCAFSMFDLQVR 256
CTGY Y FPFL + ++V+DN V PLY+H+ P++ F+G+P V ++Q R
Sbjct: 269 CTGYNYSFPFLDTNGKVTVDDNRVGPLYEHVFPPELAPSLSFVGIPGKVVLPVFIEVQAR 328
Query: 257 YYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAHMM 382
+ + ++G +LPS EEM EE + + G KR H M
Sbjct: 329 WVAQVLSGRRTLPSPEEMQRAVEEHTRGMEAAGLPKRWTHDM 370
>07_01_0087 + 676501-677907
Length = 468
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISVEDNCVEPLYKHLVN-IHHPTMCFIGVPYYVCAFSMFDLQVR 256
CTG Y +PFL ++V+DN V PL+ H+ P++ F+G+P V ++Q R
Sbjct: 287 CTGNTYSYPFLDTDGKVTVDDNRVGPLFDHVFPPALAPSLSFVGIPAMVVVPLFNEVQAR 346
Query: 257 YYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAH 376
+ + ++G +LPS EEM EE + R + G KR+ H
Sbjct: 347 WVAQVLSGRRALPSPEEMARAAEEYNRGREAAGVAKRRTH 386
>02_04_0363 +
22369461-22370127,22370240-22370310,22370412-22370978,
22371056-22371301
Length = 516
Score = 66.9 bits (156), Expect = 2e-11
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISVED--NCVEPLYKHLVNIH-HPTMCFIGVPYYVCAFSMFDLQ 250
CTGY Y FPFL ++V+D N + PL++H P++ F+G+P V F+ Q
Sbjct: 329 CTGYRYSFPFLDTEGKVAVDDDDNRIGPLFEHTFPPSLAPSLSFVGIPRKVMVPWFFEAQ 388
Query: 251 VRYYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAHMMGPDQ-----EKYYASL 415
R+ ++G +LPS EEM EE + R G K H + P + EKY
Sbjct: 389 GRWIAGVLSGRRALPSEEEMTRSVEEFYRARELAGVPKAHTHDVEPHKMYELGEKYCDFP 448
Query: 416 ATEAGTKSLPSVLTK 460
TE + L +++++
Sbjct: 449 RTEEWKRELMAIISR 463
>06_03_0298 - 19272257-19273714
Length = 485
Score = 63.3 bits (147), Expect = 3e-10
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +2
Query: 80 CTGYLYDFPFLHESCNISV-EDNCVEPLYKHLVNIH-HPTMCFIGVPYYVCAFSMFDLQV 253
CTGY Y +PFL ++V +DN V PL++H+ P++ F+G+P V F+ Q
Sbjct: 280 CTGYSYSYPFLDTGGKVTVDDDNRVGPLFEHVFPPELAPSLSFLGIPNMVTT-RFFEAQA 338
Query: 254 RYYIRSINGTFSLPSTEEMIAHWEEEKKDRASRGYTKRQAH 376
R+ + ++G +LP +M+ EE + + G +R+AH
Sbjct: 339 RWVAQVLSGRRALPPAGDMLRAAEEHARAMDAAGVARRRAH 379
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 128 ISVEDNCVEPLYKHLVN-IHHPTMCFIGVPYYVCAFSMFDLQVRYYIRSINGTFSLPSTE 304
++V+DN V PLY+H+ P++ F+G+P V ++Q R+ + ++G +LPS
Sbjct: 257 VTVDDNRVGPLYEHVFPPALAPSLSFVGIPVKVILPRFAEVQARWVAQVLSGRRTLPSPG 316
Query: 305 EMIAHWEEEKKDRASRGYTKRQAHMMGPDQE 397
EM+ EE + + + G KRQ H + D E
Sbjct: 317 EMLRAVEEYNRAKEAAGLPKRQTHDLFLDLE 347
>03_01_0580 +
4293079-4293582,4293797-4294037,4294982-4295160,
4295319-4295674,4295761-4296100
Length = 539
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 134 VEDNCVEPLYKHLVNIHHPTMCFIGVPYYVCAFSMFDLQVRYYIRSINGTFSLPSTEEMI 313
V + + PLY+ ++ P M F+G V +L+ R+ + G F+LP+ EEM+
Sbjct: 417 VNKSSMMPLYRGTIHPLIPNMAFVGYVESVSNLHTSELRCRWLAGLLGGRFALPAVEEMV 476
Query: 314 AH--WEEEKKDRASRGYTK 364
H E E R +R Y +
Sbjct: 477 RHVDGETEAMRRTTRFYRR 495
>06_01_0717 -
5219848-5220178,5220268-5220617,5221807-5221982,
5222065-5222302,5224492-5224657,5224792-5225159,
5225261-5225436,5227742-5227976,5228242-5228493,
5228513-5228848
Length = 875
Score = 34.3 bits (75), Expect = 0.14
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 155 PLYKHLVNIHHPTMCFIGVPYYVCAFSMFDLQVRYYIRSINGTFSLPST---EEMIAHWE 325
PLY+ V+ P M IG + + F++ ++ + G F LPS E A W+
Sbjct: 763 PLYRQCVHPRIPQMAVIGYTENLTSIYTFEMMAKWVAHLLAGAFRLPSVVRMEASAAEWD 822
Query: 326 E 328
E
Sbjct: 823 E 823
>11_04_0057 -
12953479-12954364,12954484-12955034,12955125-12955342,
12957514-12957678,12960562-12960898
Length = 718
Score = 32.7 bits (71), Expect = 0.41
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 290 LPSTEEMIAHWEEEKKDRASRG 355
L E+ IAHW+E +KDRA RG
Sbjct: 296 LAFAEDQIAHWDEAQKDRALRG 317
>03_05_0083 - 20616432-20616469,20616666-20617119
Length = 163
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 313 RPLGGGEERQSFE-GIHE-TTGPHDGTRPGKILRIVGYGSGHEIPAVGVDEDPG 468
RPL G R+ +E G+ G G RPGK R VG GSG E +G + G
Sbjct: 73 RPLHGHHRRRYWEWGLAMGRRGAVWGCRPGKGKRGVGRGSGEERHRLGAPAEEG 126
>07_03_0972 +
23043034-23043203,23045120-23045600,23045621-23045734,
23045807-23046592
Length = 516
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 313 DHLLSGR-KTKGPVNGTYVISDL-QVKHGECAHVVRHADEAHGRVVDVDQVLVERLHAVV 140
D++L KT G + ++ L +VK AH A +AHG +V + + V H V
Sbjct: 239 DYILDWEFKTSGSIKLVVSLTGLLEVKATAYAHADEVAQDAHGTLVAENTIAVYHDHYVT 298
Query: 139 FH 134
+H
Sbjct: 299 YH 300
>09_06_0182 -
21397221-21397575,21397712-21398076,21398510-21398685,
21398802-21399039,21399627-21400118
Length = 541
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 149 VEPLYKHLVNIHHPTMCFIGVPYYVCAFSMFDLQVRYYIRSINGTFSLPSTEEM---IAH 319
+ P ++ ++ P + IG + +L ++ ++G+F LPS +EM I
Sbjct: 419 IVPHFRQCIHPRIPQLAIIGYAESWSNLCVSELLSKWLAHFLHGSFRLPSVKEMEEDIDE 478
Query: 320 WEEEKKDRASRGYTKRQAHMMGP 388
W++ K R S G +R +GP
Sbjct: 479 WDKYMK-RYSPGRFRRSC--IGP 498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,156,916
Number of Sequences: 37544
Number of extensions: 537576
Number of successful extensions: 1420
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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