Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_B13
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020805-1|AAH20805.1|  310|Homo sapiens tRNA splicing endonucle...    49   2e-05
BC004530-1|AAH04530.1|  310|Homo sapiens TSEN34 protein protein.       49   2e-05
AK025929-1|BAB15284.1|  315|Homo sapiens protein ( Homo sapiens ...    49   2e-05
BC146835-1|AAI46836.1|  716|Homo sapiens Unknown (protein for MG...    32   3.0  
AB046861-1|BAB13467.1|  718|Homo sapiens KIAA1641 protein protein.     32   3.0  
D13633-1|BAA02797.2|  876|Homo sapiens KIAA0008 protein.               31   7.0  
BT007344-1|AAP36008.1|  765|Homo sapiens discs, large homolog 7 ...    31   7.0  
BC016276-1|AAH16276.2|  846|Homo sapiens discs, large homolog 7 ...    31   7.0  
BC010658-1|AAH10658.2|  846|Homo sapiens discs, large homolog 7 ...    31   7.0  
AB076695-1|BAB97376.1|  846|Homo sapiens hepatoma up-regulated p...    31   7.0  

>BC020805-1|AAH20805.1|  310|Homo sapiens tRNA splicing endonuclease
           34 homolog (S. cerevisiae) protein.
          Length = 310

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
 Frame = +3

Query: 129 MIPIYVEKGIGYLWNSEHWYILRTHHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALL 308
           M+ + V  G   +W +E    LR    +    VG++P  PRQN  LGLP+ L  EE  LL
Sbjct: 1   MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL 60

Query: 309 VEKRICEIHEMPAEFCKYE--PTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDII 482
            E     +   P    ++        K   EE  ++     A A + R+ ++L +KI   
Sbjct: 61  AEIGAVTLVSAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRR-QELLEKITEG 119

Query: 483 VAGKKKNL 506
            A KK+ L
Sbjct: 120 QAAKKQKL 127


>BC004530-1|AAH04530.1|  310|Homo sapiens TSEN34 protein protein.
          Length = 310

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
 Frame = +3

Query: 129 MIPIYVEKGIGYLWNSEHWYILRTHHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALL 308
           M+ + V  G   +W +E    LR    +    VG++P  PRQN  LGLP+ L  EE  LL
Sbjct: 1   MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL 60

Query: 309 VEKRICEIHEMPAEFCKYE--PTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDII 482
            E     +   P    ++        K   EE  ++     A A + R+ ++L +KI   
Sbjct: 61  AEIGAVTLVSAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRR-QELLEKITEG 119

Query: 483 VAGKKKNL 506
            A KK+ L
Sbjct: 120 QAAKKQKL 127


>AK025929-1|BAB15284.1|  315|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22276 fis, clone HRC03723. ).
          Length = 315

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
 Frame = +3

Query: 129 MIPIYVEKGIGYLWNSEHWYILRTHHRICSAFVGSVPSFPRQNDFLGLPIALSSEETALL 308
           M+ + V  G   +W +E    LR    +    VG++P  PRQN  LGLP+ L  EE  LL
Sbjct: 1   MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL 60

Query: 309 VEKRICEIHEMPAEFCKYE--PTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKIDII 482
            E     +   P    ++        K   EE  ++     A A + R+ ++L +KI   
Sbjct: 61  AEIGAVTLISAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRR-QELLEKITEG 119

Query: 483 VAGKKKNL 506
            A KK+ L
Sbjct: 120 QAAKKQKL 127


>BC146835-1|AAI46836.1|  716|Homo sapiens Unknown (protein for
           MGC:167812) protein.
          Length = 716

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 20/58 (34%), Positives = 36/58 (62%)
 Frame = +3

Query: 300 ALLVEKRICEIHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKI 473
           A +++KRI E  E+ ++  K+E  E +KEL    L+  ++Q+    K+R +E+L QK+
Sbjct: 254 ASVLQKRISEKEEIKSQL-KHEILELEKELCS--LRFAIQQEKK--KRRNVEELHQKV 306


>AB046861-1|BAB13467.1|  718|Homo sapiens KIAA1641 protein protein.
          Length = 718

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 20/58 (34%), Positives = 36/58 (62%)
 Frame = +3

Query: 300 ALLVEKRICEIHEMPAEFCKYEPTEKDKELMEEFLKKVLEQQASALKKRKIEQLSQKI 473
           A +++KRI E  E+ ++  K+E  E +KEL    L+  ++Q+    K+R +E+L QK+
Sbjct: 256 ASVLQKRISEKEEIKSQL-KHEILELEKELCS--LRFAIQQEKK--KRRNVEELHQKV 308


>D13633-1|BAA02797.2|  876|Homo sapiens KIAA0008 protein.
          Length = 876

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 313 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTNAEHIR 206
           S N AVS   N +G P+++    N G + T +EH++
Sbjct: 672 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 707


>BT007344-1|AAP36008.1|  765|Homo sapiens discs, large homolog 7
           (Drosophila) protein.
          Length = 765

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 313 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTNAEHIR 206
           S N AVS   N +G P+++    N G + T +EH++
Sbjct: 561 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 596


>BC016276-1|AAH16276.2|  846|Homo sapiens discs, large homolog 7
           (Drosophila) protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 313 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTNAEHIR 206
           S N AVS   N +G P+++    N G + T +EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677


>BC010658-1|AAH10658.2|  846|Homo sapiens discs, large homolog 7
           (Drosophila) protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 313 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTNAEHIR 206
           S N AVS   N +G P+++    N G + T +EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677


>AB076695-1|BAB97376.1|  846|Homo sapiens hepatoma up-regulated
           protein protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 313 STNNAVSSEDNAIGSPKKSFCLGNEGTEPTNAEHIR 206
           S N AVS   N +G P+++    N G + T +EH++
Sbjct: 642 SVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVK 677


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,887,460
Number of Sequences: 237096
Number of extensions: 2287815
Number of successful extensions: 13176
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13171
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)