Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_B03
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X12945-1|CAA31405.1|  661|Drosophila melanogaster vasa protein.        66   5e-11
M23560-1|AAA29013.1|  648|Drosophila melanogaster protein ( D.me...    66   5e-11
AE014134-2564|AAF53438.1|  661|Drosophila melanogaster CG3506-PA...    65   1e-10
AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p pro...    33   0.53 
AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA ...    33   0.53 

>X12945-1|CAA31405.1|  661|Drosophila melanogaster vasa protein.
          Length = 661

 Score = 66.5 bits (155), Expect = 5e-11
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +2

Query: 476 DNEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKXDHIAVKVSGENPPRPIE 652
           +N I E+ E K+   Y+PPEP+ND  EIFSS I+SGI+F K ++I VKV+G + P+PI+
Sbjct: 188 NNNIAEDVERKREF-YIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQ 245



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = +1

Query: 655 FETANLRKYVLDNVLKAGYRKPHLFRKMQSXXIMSGRKFDGXXXXXXXXXXXXFXVPIIN 834
           F +A+LR  ++DNV K+G++ P   +K     I SGR                F +PI++
Sbjct: 247 FTSADLRDIIIDNVNKSGFKIPTPIQKCSIPVISSGRDLMA-CAQTGSGKTAAFLLPILS 305

Query: 835 MLLQDPKDL 861
            LL+DP +L
Sbjct: 306 KLLEDPHEL 314


>M23560-1|AAA29013.1|  648|Drosophila melanogaster protein (
           D.melanogaster antigenMab46F11 (vasa) mRNA, complete
           cds. ).
          Length = 648

 Score = 66.5 bits (155), Expect = 5e-11
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +2

Query: 476 DNEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKXDHIAVKVSGENPPRPIE 652
           +N I E+ E K+   Y+PPEP+ND  EIFSS I+SGI+F K ++I VKV+G + P+PI+
Sbjct: 175 NNNIAEDVERKREF-YIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQ 232



 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 24/69 (34%), Positives = 36/69 (52%)
 Frame = +1

Query: 655 FETANLRKYVLDNVLKAGYRKPHLFRKMQSXXIMSGRKFDGXXXXXXXXXXXXFXVPIIN 834
           F +A+LR  ++DNV K+GY+ P   +K     I SGR                F +PI++
Sbjct: 234 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMA-CAQTGSGKTAAFLLPILS 292

Query: 835 MLLQDPKDL 861
            LL+DP +L
Sbjct: 293 KLLEDPHEL 301


>AE014134-2564|AAF53438.1|  661|Drosophila melanogaster CG3506-PA
           protein.
          Length = 661

 Score = 65.3 bits (152), Expect = 1e-10
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +2

Query: 476 DNEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKXDHIAVKVSGENPPRPIE 652
           +N I E+ E K+   Y+PPEP+ND  EIFSS I+SGI+F K ++I VKV+G + P+PI+
Sbjct: 188 NNNIVEDVERKREF-YIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQ 245



 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 24/69 (34%), Positives = 36/69 (52%)
 Frame = +1

Query: 655 FETANLRKYVLDNVLKAGYRKPHLFRKMQSXXIMSGRKFDGXXXXXXXXXXXXFXVPIIN 834
           F +A+LR  ++DNV K+GY+ P   +K     I SGR                F +PI++
Sbjct: 247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMA-CAQTGSGKTAAFLLPILS 305

Query: 835 MLLQDPKDL 861
            LL+DP +L
Sbjct: 306 KLLEDPHEL 314


>AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p
           protein.
          Length = 798

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +2

Query: 491 ENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKXDHIAVKVSGEN-PPRPIESSKLQ 667
           E G +    T +       E E+F    ++GINFDK + I V+ +G+N PP       +Q
Sbjct: 243 EGGGSNVDYTKLGARDERLEVELFGVG-NTGINFDKYEDIPVEATGQNVPPNITSFDDVQ 301

Query: 668 ISE 676
           ++E
Sbjct: 302 LTE 304


>AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA
           protein.
          Length = 798

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +2

Query: 491 ENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKXDHIAVKVSGEN-PPRPIESSKLQ 667
           E G +    T +       E E+F    ++GINFDK + I V+ +G+N PP       +Q
Sbjct: 243 EGGGSNVDYTKLGARDERLEVELFGVG-NTGINFDKYEDIPVEATGQNVPPNITSFDDVQ 301

Query: 668 ISE 676
           ++E
Sbjct: 302 LTE 304


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,026,339
Number of Sequences: 53049
Number of extensions: 420805
Number of successful extensions: 1615
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)