Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_B01
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0167 - 22868506-22868580,22868693-22869103                       31   1.6  
12_01_0307 - 2312816-2313133,2313920-2313967,2314337-2314393,231...    29   6.4  
06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760...    29   6.4  
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556...    29   6.4  
03_01_0651 - 4767836-4767856,4768111-4768457,4768582-4768751,476...    29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  

>05_05_0167 - 22868506-22868580,22868693-22869103
          Length = 161

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 623 GVSPWKAPSXRSPVPDPAAYRIPVRLSPL 709
           GV+ WK P  R P+P    +RI  +L  L
Sbjct: 106 GVNDWKQPGWRGPIPPSRGHRIQFKLYAL 134


>12_01_0307 -
           2312816-2313133,2313920-2313967,2314337-2314393,
           2315749-2315822,2316116-2316285,2316415-2316509
          Length = 253

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 728 ESATLPEGEKGGQVSGKRQGREQESAXRELSR 633
           E+ T+PE E+ G   G  +GRE     RE  R
Sbjct: 161 ETPTVPEVERAGATDGDGEGRENVRGRRERRR 192


>06_03_1190 -
           28274801-28275163,28275662-28275853,28275965-28276088,
           28276177-28276320,28276524-28276640,28277189-28277308,
           28277433-28277521,28277609-28277685,28278250-28278322,
           28278578-28279012,28280247-28280442,28281270-28281490,
           28281591-28281703,28282552-28283146,28283236-28283418,
           28283548-28283712,28283808-28284029
          Length = 1142

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 662 VPDPAAYRIPVRLSPLR-EAWRFLIAH 739
           +P PA YR+P+R    R E W+  I H
Sbjct: 122 IPPPAGYRVPIRWPRSRDEVWKANIPH 148


>04_04_1107 -
           30954647-30954769,30955052-30955141,30955309-30955617,
           30955732-30955842,30955945-30956379,30956452-30956610,
           30957044-30957994,30959016-30959483
          Length = 881

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 596 KPDRTIKIPGVSPWKAPSXRSPVPDPAAYRIPVRL 700
           +P R + IPG  P  A    +PVP P     P R+
Sbjct: 54  RPRRALPIPGRGPPPAAVLHAPVPVPVQVPAPARM 88


>03_01_0651 -
           4767836-4767856,4768111-4768457,4768582-4768751,
           4768848-4769162,4769758-4769882,4770743-4771036
          Length = 423

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 557 RASQKSTLKSEVAKPDRTIKIPGVSPWKAPSXRSPVPDPAA 679
           +A    + K     PD+ + +  V  W  P+  +P P+P+A
Sbjct: 6   KAKPSRSRKKAKPSPDQAVALDYVRAWAHPAASAPPPEPSA 46


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 303 NESAN---ARGEAVCVLGALPLPRSLTRCAR 386
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,227,426
Number of Sequences: 37544
Number of extensions: 497628
Number of successful extensions: 1637
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)