Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_A23
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 194 2e-50
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 129 5e-31
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 80 5e-16
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 56 9e-09
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 54 4e-08
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 41 2e-04
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 40 5e-04
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 39 8e-04
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 38 0.001
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 38 0.002
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 37 0.003
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 36 0.006
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 35 0.014
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 33 0.073
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 31 0.17
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 31 0.22
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 31 0.30
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 29 0.90
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 29 0.90
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 29 0.90
SPBC651.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 27 3.6
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 27 4.8
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 26 6.4
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 26 8.4
SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dl... 26 8.4
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 194 bits (472), Expect = 2e-50
Identities = 99/228 (43%), Positives = 126/228 (55%)
Frame = +2
Query: 185 KNPAAGDKFKEISYAYEVLSDPKKRQVYDLYXXXXXXXXXXXXXFPADEIXXXXXXXXXX 364
KNP AGDKFKEIS AYE+L+D +KR YD + AD++
Sbjct: 37 KNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGGMSADDLFASFFGGGMF 96
Query: 365 XXXXXXXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLI 544
P +G+D +H + VTLEDLY GKTTKL L K VIC C G GGK GS+
Sbjct: 97 GGGMPRG-----PRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVICPKCSGRGGKEGSVK 151
Query: 545 SCKDCRGQGIKVSYQQIAPHMTRQFHSRCPSCLGQGETFNEXXXXXXXXXXXVLNETKIL 724
SC C G G+K + + P M ++ CP C G GET + V+++ KIL
Sbjct: 152 SCASCNGSGVKFITRAMGP-MIQRMQMTCPDCNGAGETIRDEDRCKECDGAKVISQRKIL 210
Query: 725 EVHIEKGMRDNQKIYFRGEGDQQPDTEPGDVIIVLQQKPHEKFKRNGD 868
VH+EKGM + QKI F+ EG+Q P PGDVI V+ QK H +FKR+GD
Sbjct: 211 TVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGD 258
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1
Query: 85 DNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
+ KLYE+L V AS++E+K+ Y KLA ++HP
Sbjct: 4 ETKLYEVLNVDVTASQAELKKAYRKLALKYHP 35
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 129 bits (312), Expect = 5e-31
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Frame = +2
Query: 197 AGDKFKEISYAYEVLSDPKKRQVYDLYXXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXX 376
A ++F+ + AY++L DP+ R++YD+Y D++
Sbjct: 46 AAERFRGVQEAYDILKDPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGP 105
Query: 377 XXXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLIS-CK 553
RG D +H ++LED++ GK KL+ ++N +C C+G GGK + C
Sbjct: 106 GKNVPRDRKRRGSDVIHDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCL 165
Query: 554 DCRGQGIKVSYQQIAPHMTRQFHSRCPSCLGQGETFNEXXXXXXXXXXXVLNETKILEVH 733
C G+G+K + + PH C +C G+G +F + E ++L
Sbjct: 166 SCDGKGVKQHLKHVGPHHVTNSQVICDTCNGKGVSFRGKDRCKHCKGSGTVPEQRMLSFF 225
Query: 734 IEKGMRDNQKIYFRGEGDQQPDTEPGDVIIVLQQKPHEKFKRNGD 868
+ + ++N KI RG D+ PGDVI+ L QKPH F+R GD
Sbjct: 226 VNRSAKENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGD 270
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 82 LDNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
+D KLY+IL V AS EIK++Y +LA HP
Sbjct: 3 VDTKLYDILEVHFEASAEEIKKSYKRLALLHHP 35
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 79.8 bits (188), Expect = 5e-16
Identities = 58/226 (25%), Positives = 88/226 (38%), Gaps = 11/226 (4%)
Frame = +2
Query: 188 NPAAGDKFKEISYAYEVLSDPKKRQVYDLYXXXXXXXXXXXXX------FPADEIXXXXX 349
N A +KF EI+ A+EVLSDP++R++YD Y FP
Sbjct: 42 NEEAQEKFIEINKAHEVLSDPEQRKIYDAYGEEGLNGQPGGPGGGPGEGFPGGGFGFDPF 101
Query: 350 XXXXXXXXXXXXXXXXXPVRGEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGK 529
RG + + L Y G + L++ C+ C G G
Sbjct: 102 GDIFDNIFGGRRRQNAVR-RGPSMEQIVQIHLSSFYTGGSFTLEIPVKRTCSVCSGQGFN 160
Query: 530 PG-----SLISCKDCRGQGIKVSYQQIAPHMTRQFHSRCPSCLGQGETFNEXXXXXXXXX 694
P ++ SC C G G +V IAP +Q C +C G G T
Sbjct: 161 PKYSADKAIESCPVCGGSGFRVIEHMIAPGFRQQMRMPCNACNGNGRTIKH--KCPRCKG 218
Query: 695 XXVLNETKILEVHIEKGMRDNQKIYFRGEGDQQPDTEPGDVIIVLQ 832
V + ++ + G + +I FRG+ D+ P E GD+I++L+
Sbjct: 219 ERVAEVVESFDIKVPAGAPEGYRIGFRGKADEIPGMEAGDIIVILE 264
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 100 EILGVSKNASESEIKRNYHKLAKEFHP 180
+ILGVSK+ASESEI++ Y +L K++HP
Sbjct: 10 QILGVSKDASESEIRKAYRQLTKQWHP 36
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 55.6 bits (128), Expect = 9e-09
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 9/161 (5%)
Frame = +2
Query: 410 GEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLIS-CKDCRGQGIKVSY 586
GED + + + G L S + C+ C G G +PGS S C C+G G ++ +
Sbjct: 210 GEDIEASITIDFMEAVRGAKKDLSYSVSSTCSSCHGSGLQPGSHKSTCFACKGTGQRLHF 269
Query: 587 QQIAPHMTRQFHSRCPSCLGQGETFNEXXXXXXXXXXXVLNETKILEVHIEKGMRDNQKI 766
+ HM + C SC G G T + E K + + I G+ DN +
Sbjct: 270 IPPSFHM----QTTCDSCGGTGTTIPPNSACRSCMGSGTVRERKTVSIDIPPGIDDNTVL 325
Query: 767 YFRGEGDQ--------QPDTEPGDVIIVLQQKPHEKFKRNG 865
G G+ + PGD+ + + H F R G
Sbjct: 326 RVMGAGNDASTAKGGPNAKSRPGDLFATIHVRKHPFFVREG 366
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 79 WLDNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
W Y+ LGVSK+AS SEIK Y+KLAK++HP
Sbjct: 82 WEMTDPYKTLGVSKSASASEIKSAYYKLAKQYHP 115
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 194 AAGDKFKEISYAYEVLSDPKKRQVYDLY 277
AA DKF EI AYEVL DPKK++ +D Y
Sbjct: 122 AAQDKFVEIKQAYEVLQDPKKKKAFDTY 149
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 53.6 bits (123), Expect = 4e-08
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 716 KILEVHIEKGMRDNQKIYFRGEGDQQPDTEPGDVIIVLQQKPHEKFKRNGD 868
+ILE+ ++ G + KI F GEGD++PD D+ VL +KPH F R+GD
Sbjct: 244 RILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGD 294
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 185 KNPAAGDKFKEISYAYEVLSDPKKRQVYDLY 277
KNP KFKEIS AYEVLSDP++R++YD Y
Sbjct: 37 KNPNGEKKFKEISLAYEVLSDPQRRKLYDQY 67
Score = 40.3 bits (90), Expect = 4e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 85 DNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
D KLY+ L V ASE+E+K+ Y KLA ++HP
Sbjct: 4 DTKLYDCLEVRPEASEAELKKAYRKLALKYHP 35
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 176 TRXKNPAAGDKFKEISYAYEVLSDPKKRQVYD 271
T + AA +KF+ I +AYEVLSDP K+++YD
Sbjct: 41 TADQKAAAEEKFQIIQHAYEVLSDPSKKEIYD 72
Score = 35.1 bits (77), Expect = 0.014
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 91 KLYEILGVSKNASESEIKRNYHKLAKEFHP 180
+LY LG+ K+A+ +IK +Y++L++ FHP
Sbjct: 8 ELYLALGLPKDATSDQIKESYYRLSRLFHP 37
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHPXQKS 192
Y+ILGVSK A++ EIK+ Y KLA +HP + +
Sbjct: 351 YKILGVSKEATDIEIKKAYRKLALVYHPDKNA 382
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 188 NPAAGDKFKEISYAYEVLSDPKKRQVYD 271
N A +FKE+ AY +LSDP+ R+ +D
Sbjct: 384 NLEAEARFKEVGEAYTILSDPESRRRFD 411
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 39.1 bits (87), Expect = 8e-04
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +1
Query: 76 KWLDNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
K+ +++ YEIL + K +++EIK++Y KLA + HP
Sbjct: 108 KYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHP 142
Score = 33.1 bits (72), Expect = 0.056
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 191 PAAGDKFKEISYAYEVLSDPKKRQVYD 271
P+A + FK +S A++VLSDP R YD
Sbjct: 148 PSADEAFKMVSKAFQVLSDPNLRAHYD 174
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +1
Query: 82 LDNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
+D + Y++LG+S +A+ +IK+ Y KLA ++HP
Sbjct: 5 VDTEYYDLLGISTDATAVDIKKAYRKLAVKYHP 37
Score = 33.1 bits (72), Expect = 0.056
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +2
Query: 185 KNP----AAGDKFKEISYAYEVLSDPKKRQVYDLY 277
KNP A +KF++IS AY+VL D K R YD +
Sbjct: 39 KNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQF 73
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/30 (56%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +2
Query: 185 KNP-AAGDKFKEISYAYEVLSDPKKRQVYD 271
+NP AA +KF++++ AY+VLSDPK R+ YD
Sbjct: 43 ENPEAAREKFQKLAEAYQVLSDPKLREKYD 72
Score = 32.3 bits (70), Expect = 0.097
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 82 LDNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
+D Y+IL +S +A IK++Y +LA +HP
Sbjct: 6 VDRDYYDILNISVDADGDTIKKSYRRLAILYHP 38
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 37.1 bits (82), Expect = 0.003
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHP 180
YEILG++K S +++R+Y +L+ +FHP
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHP 127
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 85 DNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
D YEIL V+ ++ EIK NY KLA ++HP
Sbjct: 7 DMDCYEILQVNHDSDLQEIKANYRKLALQYHP 38
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 58 PLHHGKKWLDNKLYEILGVSKNASESEIKRNYHKLAKEFHP 180
PL + +D Y +LGV K+AS+ I+R Y K A + HP
Sbjct: 20 PLTYSFIKMDIDPYSVLGVEKDASDELIRRAYRKKALQHHP 60
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 185 KNPAAGDKFKEISYAYEVLSDPKKRQVYD 271
K A +F +++ AY VLSD K+R+ YD
Sbjct: 68 KKVEARIEFDKVAIAYGVLSDKKRRKHYD 96
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 32.7 bits (71), Expect = 0.073
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHP 180
YE+LG++++A + EI R + K + ++HP
Sbjct: 11 YELLGINEDAQDQEIHRAWRKTSLKYHP 38
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 188 NPAAGDKFKEISYAYEVLSDPKKRQVYD 271
+P A +KF + AY L D + R+ YD
Sbjct: 44 DPKAAEKFHMLQLAYNALIDVQLRKAYD 71
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +2
Query: 104 FWAFLKMPANPKLNEITTNLLKSSTRX---KNPA----AGDKFKEISYAYEVLSDPKKRQ 262
++A LK+ N +I L + + +NP A +F+ + A+EVLSD KR
Sbjct: 13 YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72
Query: 263 VYD 271
+YD
Sbjct: 73 IYD 75
Score = 29.5 bits (63), Expect = 0.68
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHP 180
Y IL + KNA+ +I++ Y LA ++HP
Sbjct: 14 YAILKLQKNATFQQIRKQYLFLALQYHP 41
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHPXQKSCS 198
Y IL ++ AS EIK Y K A E HP + S S
Sbjct: 6 YAILNITPKASAEEIKYAYKKAALETHPDRVSPS 39
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHP 180
YEIL + + + ++IKR Y +L K+ HP
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHP 61
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 209 FKEISYAYEVLSDPKKRQVYD 271
FK I AYE+LSDP +R+ +D
Sbjct: 144 FKCIQKAYEILSDPVRRRQFD 164
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 29.1 bits (62), Expect = 0.90
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 49 LFNPLHHGKKWLDNK--LYEILGVSKNASESEIKRNYHKLAKEFHP 180
+F + K L NK YE+L V AS EI R Y K + +HP
Sbjct: 24 IFRVVDSLKSILKNKATFYELLEVPTKASIKEINRAYRKKSILYHP 69
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 97 YEILGVSKNASESEIKRNYHKLAKEFHP 180
Y ILG +S EI++ Y KL +HP
Sbjct: 14 YTILGAESTSSYVEIRQQYLKLVLRYHP 41
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 206 KFKEISYAYEVLSDPKKRQVYD 271
+F+ I A+EVL DPK R+++D
Sbjct: 54 QFQLIQKAHEVLKDPKLRELFD 75
>SPBC651.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 237
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 25 YREFLKILLFNPLHHGKKWLDNKLYEILGVSKNASESEIKRNYHKLA 165
+R + + NP HHG+K + L+++ G K+ S S + H+++
Sbjct: 30 FRTQYESIFKNPKHHGEKKPFHCLFKLAGTMKSISLSHLDIPEHRMS 76
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 49 LFNPLHHGKKWLDNKLYEILGVSKNAS 129
+FNP GKKW +L E+LG N S
Sbjct: 818 MFNPKEVGKKW--KQLLEVLGFEVNNS 842
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 590 QIAPHMTRQFHSRCPSCLGQGET 658
++ P+ FH+ CPSC Q +T
Sbjct: 246 EVDPNEVHTFHATCPSCSHQCDT 268
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 31 EFLKILLFNPLHHGKKWLDNKLYEILGVSKNASESEIKRNYHKLAKEFHPXQKSCSW 201
+FL+ + + K L N LYE++ K K Y+ L ++++P +K C W
Sbjct: 210 QFLQYVWSDNHRDEMKTLYNCLYELIDRDK-------KSIYNYLRRKYNPFKKKCKW 259
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 92 NYTRFWAFLKMPANPKLNEITTNLLKSSTRXK 187
NY RF+ K+ KL+EI+ +LL + ++ K
Sbjct: 139 NYVRFFIQPKLNNTSKLDEISDSLLNAFSKLK 170
>SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dlp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 131 NPKLNEITTNLLKSSTRXKNPAAGDKFKEISYAYEVLSDPKKRQVYDLY 277
NP L+EIT KSSTR +P S V DP +Q++ Y
Sbjct: 70 NPLLDEITKPYRKSSTRFFHPLLVLLMSRAS----VNGDPPSQQLFQRY 114
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,478,199
Number of Sequences: 5004
Number of extensions: 72251
Number of successful extensions: 232
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -