Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_A06
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    47   2e-07

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 47.2 bits (107), Expect = 2e-07
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
 Frame = +1

Query: 109 NQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG----VM 276
           N  RI GG+   I+ +P +A    T +       CG++I++ R VLTAAHC+       +
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIIDENTTKL 213

Query: 277 RVRVG----SSFGNSGGRV-HQVSRYITHPNYVAVTFE----SDLAILHVSTQIVYVNNA 429
            + VG    SS   +   V H +++ I HP Y  +  +    +D+A+L     I +  + 
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKF-GDK 272

Query: 430 VRPARIAGPNY--NVADNQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVP 603
           V PA +   ++  + A + V    GWG        S  L+   L  + Q  C   + ++ 
Sbjct: 273 VGPACLPFQHFLDSFAGSDVT-VLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYYGNIM 331

Query: 604 ITA 612
           + A
Sbjct: 332 VNA 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,900
Number of Sequences: 438
Number of extensions: 5265
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)