Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_A05
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152...    29   4.9  
11_01_0340 + 2534998-2535660                                           29   6.5  
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365...    29   6.5  

>02_04_0532 +
           23711530-23711755,23712984-23713093,23713204-23715298,
           23716092-23716153,23716236-23716277,23716614-23716673,
           23716873-23717010,23717333-23717374,23717452-23717574
          Length = 965

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 444 WEIKQFLECAQQQHDLSLCDGFNEALRQ 527
           W +KQFL+C  Q+H  +L    + A+R+
Sbjct: 408 WILKQFLDCMYQKHPRALITDGDNAMRR 435


>11_01_0340 + 2534998-2535660
          Length = 220

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 139 KPSTSASKESCSPAK*C-TSSCGSIDPGY--DSSSTSAALAIRADGCHGW 279
           KP++S+S  S S       ++C   +PG    SSS+S     RAD C  W
Sbjct: 57  KPTSSSSSSSSSTGSASRAAACERKEPGSPASSSSSSGGKPGRADSCERW 106


>05_06_0126 - 25834129-25834214,25834595-25834658,25836201-25836521,
            25836912-25837040,25837118-25837177,25837251-25837548,
            25837622-25837776,25837959-25838097,25838185-25838266,
            25838337-25838455,25838537-25838664,25838810-25838983,
            25839052-25839203,25839393-25839425,25840362-25841331,
            25841412-25841537
          Length = 1011

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 761  LENKISIYTKNNNYLAGASNC 699
            L+ KI+IYT NNNY+  A+NC
Sbjct: 976  LQFKITIYTVNNNYI--AANC 994


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,341,156
Number of Sequences: 37544
Number of extensions: 365041
Number of successful extensions: 914
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)