Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_P24
(912 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537409-1|CAD97651.1| 776|Homo sapiens hypothetical protein pr... 81 5e-15
BC125120-1|AAI25121.1| 776|Homo sapiens cullin 1 protein. 81 5e-15
BC125119-1|AAI25120.1| 776|Homo sapiens cullin 1 protein. 81 5e-15
AF062536-1|AAC36681.1| 776|Homo sapiens cullin 1 protein. 81 5e-15
AC005229-1|AAM49153.1| 263|Homo sapiens cullin 1 protein. 81 5e-15
U58087-1|AAC50544.1| 752|Homo sapiens Hs-CUL-1 protein. 77 7e-14
>BX537409-1|CAD97651.1| 776|Homo sapiens hypothetical protein
protein.
Length = 776
Score = 81.0 bits (191), Expect = 5e-15
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 506 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 685
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 686 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKS-XQDLPHQSAAECAD 862
+ + VP + + ELYKRLK ++ + D
Sbjct: 60 NQARGAGVPPSKSKK----------GQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 863 LMGEXVLAF 889
LM E VL F
Sbjct: 110 LMDESVLKF 118
>BC125120-1|AAI25121.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 81.0 bits (191), Expect = 5e-15
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 506 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 685
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 686 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKS-XQDLPHQSAAECAD 862
+ + VP + + ELYKRLK ++ + D
Sbjct: 60 NQARGAGVPPSKSKK----------GQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 863 LMGEXVLAF 889
LM E VL F
Sbjct: 110 LMDESVLKF 118
>BC125119-1|AAI25120.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 81.0 bits (191), Expect = 5e-15
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 506 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 685
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 686 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKS-XQDLPHQSAAECAD 862
+ + VP + + ELYKRLK ++ + D
Sbjct: 60 NQARGAGVPPSKSKK----------GQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 863 LMGEXVLAF 889
LM E VL F
Sbjct: 110 LMDESVLKF 118
>AF062536-1|AAC36681.1| 776|Homo sapiens cullin 1 protein.
Length = 776
Score = 81.0 bits (191), Expect = 5e-15
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 506 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 685
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 686 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKS-XQDLPHQSAAECAD 862
+ + VP + + ELYKRLK ++ + D
Sbjct: 60 NQARGAGVPPSKSKK----------GQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 863 LMGEXVLAF 889
LM E VL F
Sbjct: 110 LMDESVLKF 118
>AC005229-1|AAM49153.1| 263|Homo sapiens cullin 1 protein.
Length = 263
Score = 81.0 bits (191), Expect = 5e-15
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 506 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVHHH 685
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQS 59
Query: 686 SAGSSSRVPQNNIGRVSYXXXXXXXXXXXXXXXXXXXELYKRLKS-XQDLPHQSAAECAD 862
+ + VP + + ELYKRLK ++ + D
Sbjct: 60 NQARGAGVPPSKSKK----------GQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGED 109
Query: 863 LMGEXVLAF 889
LM E VL F
Sbjct: 110 LMDESVLKF 118
>U58087-1|AAC50544.1| 752|Homo sapiens Hs-CUL-1 protein.
Length = 752
Score = 77.4 bits (182), Expect = 7e-14
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +2
Query: 506 MSTSNANRPQVPLRQKDFDQIWGDLQEGIEQVYKKQYMVKRRYIDLYTHVYNYCTSVH 679
MS++ + P L+Q DQIW DL+ GI+QVY +Q M K RY++LYTHVYNYCTSVH
Sbjct: 1 MSSTRSQNPH-GLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVH 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,022,764
Number of Sequences: 237096
Number of extensions: 2332597
Number of successful extensions: 3726
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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