Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P23
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477...    30   2.1  

>07_03_1291 +
           25545749-25546262,25546989-25547669,25547693-25547751,
           25549152-25549242,25549330-25549743,25550191-25550243,
           25550947-25551177,25551492-25551708,25551790-25551890,
           25552446-25552532,25553536-25553676,25553839-25553961,
           25554070-25554522,25554931-25555308,25555410-25556060,
           25556264-25556368,25556482-25556707,25557204-25557241
          Length = 1520

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 467 EIGKLEWF*VCNRSSL--SITTKKKIRTAVCEIMIYSRRASAREIRCAPFTHSSFYASIK 640
           +I    W  V NR S   ++  KK ++TA+CEI   +   +       PF   SF+ +I+
Sbjct: 258 KINIFAWLLVRNRLSTKKNLMKKKIVQTAICEICNLADETADHLSFTCPFA-ISFWQTIR 316

Query: 641 WQFILQPTN*LF 676
            Q I+  T  LF
Sbjct: 317 VQPIITETKFLF 328


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,507,140
Number of Sequences: 37544
Number of extensions: 274163
Number of successful extensions: 411
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)