Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P22
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                             95   5e-20
10_07_0174 + 13815478-13815903                                         95   7e-20

>03_01_0066 - 537729-538163
          Length = 144

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 42/69 (60%), Positives = 55/69 (79%)
 Frame = +2

Query: 116 TKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 295
           TKTV        EKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++   
Sbjct: 6   TKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGP 65

Query: 296 VRGISIKLQ 322
           VRGIS+KLQ
Sbjct: 66  VRGISLKLQ 74


>10_07_0174 + 13815478-13815903
          Length = 141

 Score = 95.1 bits (226), Expect = 7e-20
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +2

Query: 116 TKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 295
           TKTV        EKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++   
Sbjct: 6   TKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGP 65

Query: 296 VRGISIKLQ 322
           VRGIS+KLQ
Sbjct: 66  VRGISLKLQ 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,617,556
Number of Sequences: 37544
Number of extensions: 277167
Number of successful extensions: 509
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)