Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P22
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   2.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   2.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.8  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.5  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 32  NSLRFCFRFSLILVKSSAVQLQPWVVSGT 118
           NSL F  R  + ++ S  VQ  PWV   T
Sbjct: 311 NSLPFIDRTPIEIINSGDVQDVPWVTGVT 339


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 32  NSLRFCFRFSLILVKSSAVQLQPWVVSGT 118
           NSL F  R  + ++ S  VQ  PWV   T
Sbjct: 311 NSLPFIDRTPIEIINSGDVQDVPWVTGVT 339


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 447 WPATNTASYPGWLWWQA 497
           W  ++  S+P  +WW+A
Sbjct: 171 WICSSAISFPAIVWWRA 187


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 461 VSCRPLILLKSSIFNISLGVGV 396
           ++C  + L  SS+  I+LGVGV
Sbjct: 215 INCTYVALYPSSVQVIALGVGV 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,767
Number of Sequences: 438
Number of extensions: 3041
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)