Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P19
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   1.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   2.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   2.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.8  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 196 AWSGPRPSPLTGARKTYG 143
           A    +PSP+TGA K++G
Sbjct: 357 AQKSQKPSPVTGASKSHG 374


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 206 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFL-IGNELE 69
           M+ SL+WSST + D   +      I  ++    +S II +  G++LE
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 536


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 206 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFL-IGNELE 69
           M+ SL+WSST + D   +      I  ++    +S II +  G++LE
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 574


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 133 IRSFRTSCVRRSAEKVEDHSRLWVIERVVSAALVPLIPLALMMP 264
           +RS + SC+ R A + +    L V+     A  +P   L L  P
Sbjct: 287 VRSHQQSCINRVARETKTAGTLAVVVGGFVACWLPFFILYLATP 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,002
Number of Sequences: 438
Number of extensions: 4360
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)