Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P15
         (986 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.86 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.6  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.86
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -2

Query: 976 GNGXGGXXXGXFXXWGGXGXXXXGGFGATPPRFXGGG 866
           G G GG   G     GG G    GG G +     GGG
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
 Frame = +3

Query: 873 PXNRGGVAPNPPXXX-YPXPPXXXNXPXXXPPXPLPXP 983
           P  + G+ P PP       PP     P   PP P+  P
Sbjct: 238 PGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGP 275



 Score = 24.2 bits (50), Expect = 6.1
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +3

Query: 771 PXGXPPGXXPXGGXXXXXXXXXXXREXXPXKXPPPXNRGGVAPNPPXXXYPXPP 932
           P    PG  P              R   P +  PP   GG+ P PP    P  P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPP-RPGGMYPQPPGVPMPMRP 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,138
Number of Sequences: 2352
Number of extensions: 7998
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)