Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P10
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    34   0.59 

>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = -1

Query: 636 TCISSRVCIFCNLALILFTVKSCTFFLS*LLVCLWVTDSLNFCQLICTTLNIIQN*CHNF 457
           +C+S  VC++  + + +  V  C      + VC+ V  S+  C  IC  + +  + C + 
Sbjct: 9   SCVSVSVCLYLYVCVCI-CVSVCVCICVSVCVCICVCVSVFVCVCICVCVCVCVSMCVSI 67

Query: 456 TGCTYGC 436
           + C Y C
Sbjct: 68  SVCVYLC 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,792,227
Number of Sequences: 237096
Number of extensions: 1923082
Number of successful extensions: 2658
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2658
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)