Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P10
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z48795-4|CAA88728.1|  236|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical...    29   5.8  

>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -2

Query: 668 TKIGNKQNIQKHVFPLEYVSFVIWLLFYLQLKAVHFFCLNY*FVCGSLTL 519
           T+  + Q+ Q+H++  EYV F   L+ + +L  + +F  N  + C S ++
Sbjct: 208 TRKNSHQHSQQHIYLHEYVFFQSCLVMFFKLVTLPYFLSNLEYNCASTSM 257


>Z48795-4|CAA88728.1|  236|Caenorhabditis elegans Hypothetical
           protein R05H5.5 protein.
          Length = 236

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 594 LILFTVKSCTFFLS*LLVCLWVTDSLNFCQLICTTL 487
           L+L  V+  +F  + L+  LW  D  N+ QLI +TL
Sbjct: 127 LLLSVVEIFSFISAILMYSLWKNDETNYRQLIASTL 162


>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
           protein Y67A10A.3 protein.
          Length = 1237

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 62  VPIYPMSWYKVFASRIIKLIDLLVQL 139
           VP+Y  SW KV    +IKL+D L +L
Sbjct: 622 VPVYKSSWTKVNRDGMIKLVDDLKKL 647


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,703,818
Number of Sequences: 27780
Number of extensions: 340977
Number of successful extensions: 677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)