Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_P09
         (926 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    98   3e-19
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    76   1e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    73   1e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    48   3e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    44   0.007
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    38   0.28 
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    36   1.5  

>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 97.9 bits (233), Expect = 3e-19
 Identities = 59/112 (52%), Positives = 66/112 (58%)
 Frame = +2

Query: 368 RGKAVCXLGALPXPRSLTRCXRSFGCGERXQLTQRX*YGYPXNQGITQEXTXXQKAXKRP 547
           R   +C  G +P PRSLTR  RSFGCGER +LT           G   E T  +K   + 
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT--RKTLSKE 75

Query: 548 XTVKRPRCWRFPIGSAPLTSITKIDAQVRGGETRQDYKDXRRFPLXSSLGAL 703
               RPR  RF IGSAPLTSI K DAQ+ GGETRQDYKD RRFPL +   AL
Sbjct: 76  EI--RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL 125


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 75.8 bits (178), Expect = 1e-12
 Identities = 39/55 (70%), Positives = 42/55 (76%)
 Frame = +2

Query: 539 KRPXTVKRPRCWRFPIGSAPLTSITKIDAQVRGGETRQDYKDXRRFPLXSSLGAL 703
           K+     + RC RF IGSAPLTSITKIDAQVRGGETRQDYKD RRFPL +   AL
Sbjct: 4   KQSTGTSQRRC-RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 57



 Score = 40.7 bits (91), Expect = 0.052
 Identities = 20/37 (54%), Positives = 22/37 (59%)
 Frame = +1

Query: 679 PGKLPRCALXFRPCRLPDTVRLSPFGKRGAFSXXIXH 789
           P + P CAL FRPCRLPDT    PF  R A+   I H
Sbjct: 49  PLEAPSCALLFRPCRLPDT--CPPFSLREAWRFLIAH 83


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 72.9 bits (171), Expect = 1e-11
 Identities = 36/50 (72%), Positives = 39/50 (78%)
 Frame = +2

Query: 554 VKRPRCWRFPIGSAPLTSITKIDAQVRGGETRQDYKDXRRFPLXSSLGAL 703
           V+ PR  RF IGSAPLTSITK DAQ+ GGETRQDYKD RRFPL +   AL
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 48.4 bits (110), Expect = 3e-04
 Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = -1

Query: 773 EKAPRFPKGER-RTVSGXRQGRNXRAHRGSXPGGNAWXLYSPVG 645
           EKAPRFPKG++   VSG RQGRN RAH G+  G  +    SPVG
Sbjct: 51  EKAPRFPKGKKAEQVSGKRQGRNRRAHEGA-AGEKSPASLSPVG 93


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 43.6 bits (98), Expect = 0.007
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +2

Query: 485 YPXNQGITQEXTXXQKAXKRPXTVKRPRCWRFPIGSAPLTSITKIDAQVRGGETRQDYKD 664
           +P N  I  +    + + + P T        FP  S PLT+ITKI  Q +  +T+ +YK 
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 665 XRRFPLXS 688
              FPL S
Sbjct: 98  TTPFPLQS 105


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 38.3 bits (85), Expect = 0.28
 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 368 RGKAVCXLGALPXPRSLTRCXRSFGCGERXQL-TQRX*YGYPXNQGITQ 511
           R +AV  L ALP  RS TRC RS GCG      +    YG P  QG+ Q
Sbjct: 274 RSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 629 VRGGETRQDYKDXRRFPLXSSLGALSCSDPAXYRI-LSAFLPSGSVALS 772
           VR GETRQD K          L ALSCS+PA  RI +  F  +GSVALS
Sbjct: 23  VRSGETRQDLKIITVSDESLPL-ALSCSNPAVSRIPVPPFSLAGSVALS 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,981,275
Number of Sequences: 1657284
Number of extensions: 7698588
Number of successful extensions: 14905
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14891
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)