Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_P03
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 248 5e-66
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 248 5e-66
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 248 5e-66
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 7.8
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 248 bits (606), Expect = 5e-66
Identities = 111/151 (73%), Positives = 129/151 (85%)
Frame = +3
Query: 198 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 377
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 378 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 557
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 558 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGI 650
+PLNMILDDGGDLTNLVH KYP L ++G+
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGL 155
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = +1
Query: 670 GVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRAXT**LRGKL 837
GVHNL KM +G LKVPAINVNDSVTKSKFDNLYG RESL DGIKRA L GK+
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDGIKRATDVMLAGKV 217
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 248 bits (606), Expect = 5e-66
Identities = 111/151 (73%), Positives = 129/151 (85%)
Frame = +3
Query: 198 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 377
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 378 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 557
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 558 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGI 650
+PLNMILDDGGDLTNLVH KYP L ++G+
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGL 155
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = +1
Query: 670 GVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRAXT**LRGKL 837
GVHNL KM +G LKVPAINVNDSVTKSKFDNLYG RESL DGIKRA L GK+
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDGIKRATDVMLAGKV 217
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 248 bits (606), Expect = 5e-66
Identities = 111/151 (73%), Positives = 129/151 (85%)
Frame = +3
Query: 198 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 377
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 378 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 557
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 558 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGI 650
+PLNMILDDGGDLTNLVH KYP L ++G+
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGL 155
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = +1
Query: 670 GVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRAXT**LRGKL 837
GVHNL KM +G LKVPAINVNDSVTKSKFDNLYG RESL DGIKRA L GK+
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDGIKRATDVMLAGKV 217
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 461 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 303
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 830 PRNHYVXALLIPSSKDSLHPYKLSNLLFVTE 738
PRNH + + + P K + P K+ +LF E
Sbjct: 560 PRNHNIVSKIAPMLKSGVDPVKIDKILFNAE 590
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 688 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 789
+M+ LLK+P+I + SV F+N +G SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,559,801
Number of Sequences: 27780
Number of extensions: 410844
Number of successful extensions: 956
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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