Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_P02
(927 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 3e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.008
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 35 0.019
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 34 0.033
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.075
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.70
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 5.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 7.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/63 (38%), Positives = 25/63 (39%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXPPFXX 852
PPPPP + P P P P PP P GG PPP P PP PP
Sbjct: 732 PPPPP---PAVIVPTPAPAPIPVPPPA--PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Query: 853 XGG 861
GG
Sbjct: 787 AGG 789
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 577 PXPPPXGGXFXXXXXXXXXXXTXPXXXGXXXXPPPPPGXXXSXXFPXPPPPXPP 738
P PPP G PPPPPG + P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG--PPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 576 PXPPPXGGXXXXPPXRGGSPRXXPPGXGASXXXPPPP 686
P P P P G P PPG + PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 226 PXPXPPPXGGGLXXPPLWPXXXXXXXPPPXXSGXSPPXFRRXGAPXXGPGAPXXP 390
P P P P GG PP P PPP PP G+ P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 576 PXPPPXGGXXXXPPXRGGSPRXXPPGXGASXXXPPPP 686
P P P P G P PP G + PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 371 PXPPXXPXXXGPPPP 415
P PP P GPPPP
Sbjct: 750 PVPPPAPIMGGPPPP 764
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.7 bits (91), Expect = 3e-04
Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -2
Query: 842 GGXGGXXX--GGRXXXXXXPGG-GXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGGGGG 672
GG GG GG PGG P GG GG GG GG G G PGG GG
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 33.5 bits (73), Expect = 0.043
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -2
Query: 842 GGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGGGGG 672
GG G GG PGG GG G GG GG G G PGG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGG-EGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Score = 32.3 bits (70), Expect = 0.100
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -2
Query: 842 GGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGGGGG 672
GG GG G GG H G GG GG GG G PGG GG
Sbjct: 195 GGSGGPPPGPGGFGGF--GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 31.1 bits (67), Expect = 0.23
Identities = 27/73 (36%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = -2
Query: 857 PXXXKGGXGGXXX-GGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGG 681
P GG GG GG GG P GG GG GG GGG G GG
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP--GGFEGGP-GGFGGGPGGFGGGLGGFGG 256
Query: 680 G-GGXXXXPXXXG 645
G GG P G
Sbjct: 257 GPGGFGGGPGGHG 269
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -1
Query: 459 GPPPXPXXXKKXXXRGGGGPXXXGXXG-GXGPXXXXPXPXKXXXAAPXAXGGG 304
GPPP P GG G G G G GP P P GGG
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG-GFGGGPGGFGGG 250
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 413 GGGXXXXXGXXGAPGPXXGAPXRRKXGGLXPEXXGGGXXXXXXXGHXGGXXSPPPXGGGX 234
GGG G G P P G GG E G G G P GGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG--FGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Query: 233 G 231
G
Sbjct: 245 G 245
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 5e-04
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPP--PXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXP 840
PPPPP + P PP PP PP + P G PP PP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 35.1 bits (77), Expect = 0.014
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = +1
Query: 658 GXXXXPPPPPGXXXSXXFPXPP------PPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPP 819
G PPPPP S PP PP PP P PP G PP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 820 XXXPPXPP 843
PP P
Sbjct: 417 VPTPPSLP 424
Score = 33.5 bits (73), Expect = 0.043
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 718 PPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXPP 843
PP P PP PP APP PP PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP--LPPSAP 454
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXP 840
P PP S P P P P APP G P PP P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +1
Query: 682 PPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXP-PPGXXXXXXLPP--XXXPPXPP 843
PP P PP PP PP P P PP LP PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +1
Query: 226 PXPXPPPXGGGLXXPPLWPXXXXXXXPPPXXS----GXSPPXFRRXGAPXXGPGAP 381
P P PPP PL P PPP S G PP A P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = +1
Query: 217 KXGPXPXPPPXGGGLXXPPLWPXXXXXXXPPPXXSGXSPPXFRRXGA---PXXGPGAPXX 387
K P P PPP PP+ PPP PP G+ P G AP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPP----PPPPRSNAAGSIPLPPQGRSAPPP 363
Query: 388 PXXXXXP 408
P P
Sbjct: 364 PPPRSAP 370
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +1
Query: 676 PPPPGXXXSXXFPXPPPP-XPPXXPPXAPPXWGGXXPPPGXXXXXXLPP--XXXPPXP 840
PP + P P PP PP PP PP P G LPP PP P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPS-APPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXP 831
PP PP S P P PP PP G PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 658 GXXXXPPPPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPP 789
G PP PP + P P PP PP AP P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPP-LPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 576 PXPPPXG---GXXXXPPXRGGSPRXXPPGXGASXXXPPPP 686
P PPP G PP +P PP S PPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXP---PXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXP 840
P PP S P PP P P PP P P G LPP P P
Sbjct: 421 PSLPPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 688 GXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPP 789
G S P PP P PP P PPP
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +1
Query: 679 PPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXPP 843
PPP + P PP P PP A P PP +PP PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLP--PXXXPPXPP 843
PP P P P PP P APP P P P P PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 6/61 (9%)
Frame = +1
Query: 679 PPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLP------PXXXPPXP 840
PP P P P P P APP PP P P PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 841 P 843
P
Sbjct: 199 P 199
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 679 PPPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPP 789
PPP + P PP P P PP PPP
Sbjct: 172 PPPAQPAA---PVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/58 (39%), Positives = 25/58 (43%)
Frame = -2
Query: 845 KGGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGGGGG 672
+GG GG GGR GGG GG GG GG GG G + GG GG
Sbjct: 15 RGGRGGFN-GGRGGF----GGGRGGAR-GGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 33.5 bits (73), Expect = 0.043
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = -2
Query: 845 KGGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGGGGG 672
+GG GG GGR GG GGA GG GG GG G+ GG G
Sbjct: 8 RGGRGGSR-GGRGGFNGGRGGFGGG--RGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -2
Query: 842 GGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGK 708
GG GG GGR GG GGA GG G GG G K
Sbjct: 30 GGRGGARGGGRGGARGGRGG------RGGARGGRGGSSGGRGGAK 68
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 33.9 bits (74), Expect = 0.033
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -2
Query: 842 GGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXGKXXEXXXPGGGGGXXX 663
GG GG GG GG GG GG GGGG G P GG
Sbjct: 141 GGMGGM--GGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGGSRPS 198
Query: 662 XP 657
P
Sbjct: 199 QP 200
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.7 bits (71), Expect = 0.075
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -2
Query: 845 KGGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXG 711
+GG GG GGR GG GG+ GG GG GG G
Sbjct: 137 RGGRGGFR-GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 32.7 bits (71), Expect = 0.075
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -2
Query: 845 KGGXGGXXXGGRXXXXXXPGGGXXPPHXGGAXGGXXGGXGGGGXG 711
+GG GG G GGG GG+ GG GG GG G
Sbjct: 144 RGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = -2
Query: 791 PGGGXXPPHXGGAXGGXXGGXGG--GGXGKXXEXXXPGGGGG 672
P G P G GG GG GG GG G GG G
Sbjct: 127 PKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG 168
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 658 GXXXXPPPPPGXXXSXXFPXPPPP 729
G PPPPPG P PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 712 PXPPPPXPPXXPPXAPPXWGGXXPPPG 792
P PP PP P PP PPPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Frame = +1
Query: 646 PXXXGXXXXPPP----PPGXXXSXXFPXPPPPXPPXXPPXAPPXWGGXXPPPGXXXXXXL 813
P G P P PP S P P P PP PP P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA-GVPPVPPPSEAPPVPKPSVGVPPVP 1211
Query: 814 PPXXXPPXP 840
PP PP P
Sbjct: 1212 PPSTAPPVP 1220
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXA--PPXWGGXXPPPGXXXXXXLPPXXXPPXPP 843
PP P + P P PP P A PP PPP P PP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV-----PPPSEAPPVPKPSVGVPPVPP 1212
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Frame = +1
Query: 676 PPPPGXXXSXXFPXPPPPXPPXXPPXAP-PXWGGXXPPPGXXXXXXLPPXXXPPXP 840
PP P PP P P P P P P P P PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +1
Query: 676 PPPPGXXXSXXFPXP----PPPXPPXXPPXAPPXWGGXXPPPGXXXXXXLPPXXXPPXP 840
PP P + P P PP PP P P G P P +P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP-------VPTAKAPPVP 1240
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXAPP 762
PPPPP P P P P PP APP
Sbjct: 1707 PPPPPMSVP----PPPSAPPMPAGPPSAPP 1732
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPP---XXPPXAPPXWGG--XXPPP 789
PP P P PP PP PP APP G PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 712 PXPPPPXPPXXP-PXAPPXWGGXXPPPGXXXXXXLPPXXXPPXP 840
P P PP P APP PPP PP PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVP--PPPSAPPMP 1724
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 676 PPPPGXXXSXXFPXPPPPXPPXXPP 750
PP + P PPPP PP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 658 GXXXXPPPPPGXXXSXXFPXPPPPXPPXXPPXAPP 762
G P PP P P PP PP PP PP
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAPPPPP--PPTLPP 248
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 804 PPPPPPXXPPXS 839
PPPPPP PP S
Sbjct: 239 PPPPPPTLPPQS 250
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPX-PPPPXPPXXPPXAPPXWGGXXPPP 789
PPPPP + P PP P PP G PP
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPP 947
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +1
Query: 673 PPPPPGXXXSXXFPXPPPPXPPXXPPXAPPXW---GGXXPPPGXXXXXXLPPXXXPPXPP 843
PPPP P PP P PP G PPP P P PP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH----EPGEHMPPPP 341
Query: 844 F 846
F
Sbjct: 342 F 342
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 807 PPPPPXXPP 833
PPPPP PP
Sbjct: 945 PPPPPPPPP 953
Score = 21.0 bits (42), Expect(2) = 7.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 804 PPPPPP 821
PPPPPP
Sbjct: 907 PPPPPP 912
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 679 PPPGXXXSXXFPXPPPPXPP 738
P G + P PPPP PP
Sbjct: 295 PSSGDSANGGLPPPPPPPPP 314
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.155 0.566
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,676,043
Number of Sequences: 5004
Number of extensions: 26579
Number of successful extensions: 354
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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