Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_P01
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 49 5e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 49 5e-06
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 47 2e-05
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 39 0.005
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 39 0.005
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 37 0.017
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.4
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.4
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 29 4.4
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 4.4
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 4.4
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 4.4
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 4.4
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 29 4.4
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Frame = +2
Query: 218 YKTXAXCXTXIECRDXQA-TNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGSIQPAQT 394
Y+ C ++C + + C L FN C YP +V+ G QT
Sbjct: 1190 YRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVS----GCENHGQT 1241
Query: 395 TPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 574
+C ++G F A NC + CV GR M CP G FNP S CDW VPSC
Sbjct: 1242 NGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCS 1297
Query: 575 AE 580
+
Sbjct: 1298 GQ 1299
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 464 YRTCVGGRAFDMVCPPGLAFNPDFSRCDW 550
+ +C F CPPG FN + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 48.8 bits (111), Expect = 5e-06
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 236 CXTX-IECRDXQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGRGSIQPAQTTPDCP 409
C T + C A M CP L FNP++ C +P +V C G + QP C
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGLPTPQPT-----CE 310
Query: 410 HQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
G F S + + C GRA M CP GL F+ RCD+ V C
Sbjct: 311 ED-GYFSFGQCSSS----FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +2
Query: 431 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPG 610
HPN + + TC GG A M CP L FNP CDW V C TC
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEED 312
Query: 611 SFGCYRQSS 637
+ + Q S
Sbjct: 313 GYFSFGQCS 321
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 461 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 574
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect = 0.089
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 618 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRARLLSCDIGLAFDPTTGRCV 764
+ + N N+ + Y G C YYFF C N AR LSC L +D + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 464 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 48.8 bits (111), Expect = 5e-06
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 236 CXTX-IECRDXQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGRGSIQPAQTTPDCP 409
C T + C A M CP L FNP++ C +P +V C G + QP C
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGLPTPQPT-----CE 310
Query: 410 HQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
G F S + + C GRA M CP GL F+ RCD+ V C
Sbjct: 311 ED-GYFSFGQCSSS----FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +2
Query: 431 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPG 610
HPN + + TC GG A M CP L FNP CDW V C TC
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEED 312
Query: 611 SFGCYRQSS 637
+ + Q S
Sbjct: 313 GYFSFGQCS 321
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 461 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 574
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect = 0.089
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 618 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRARLLSCDIGLAFDPTTGRCV 764
+ + N N+ + Y G C YYFF C N AR LSC L +D + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 464 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Frame = +2
Query: 215 FYKTXAXCXTXIECRDXQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGSIQPAQT 394
FY C + C ++ +M CP GL ++ S+++ C C + P T
Sbjct: 488 FYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY----CTTSTASGCSVTTTRAPTTT 543
Query: 395 TPDCPHQYGIFKHPNAS--------------PTNCGQYRTCVGGRAFDMVCPPGLAFNPD 532
T P + P + P++C ++ CV G +++ CP GL+F+ D
Sbjct: 544 TKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHAD 603
Query: 533 FSRCDWAD 556
CD D
Sbjct: 604 TMMCDRPD 611
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +3
Query: 654 YKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCNAT 794
Y NC F C +++ +SC GL + + C + C+ T
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVT 535
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/109 (28%), Positives = 41/109 (37%)
Frame = +2
Query: 254 CRDXQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKH 433
C + A CP L FNP++ C +P V S +P +C G F
Sbjct: 197 CSEGIAHRRNCPANLVFNPAIS----SCDWPKNVMDCSEKSEKPQ----NCGEVDGYFSF 248
Query: 434 PNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 580
S + + C G M CP GL F+ CD+ V CD E
Sbjct: 249 GRCSSS----FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE 293
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 437 NASPTNCGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
N S + C + +C G A CP L FNP S CDW V C
Sbjct: 184 NISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 461 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE 580
++ CV G A M CP L ++ + CDW V C E
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Frame = +2
Query: 278 MICPDGLHFNPS-----VEWPAYPCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNA 442
M CPDGL F+ EW C +E + TP G++ +
Sbjct: 266 MFCPDGLMFSEKNQMCDYEWNVDECD--LESSGFMENYKASEALTPCTNMDNGLYAL-DC 322
Query: 443 SPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFL 589
+P + +C GR CPP L FN + CD+ + C E L
Sbjct: 323 TP----RVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDAL 367
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 681 FFSCEQNRARLLSCDIGLAFDPTTGRC 761
+ C R LSC L +DPT +C
Sbjct: 136 YIICNSGSPRFLSCSTPLIYDPTNKKC 162
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 383 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 562
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 563 PSC 571
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 461 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 678 YFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRV-QCNAT 794
++ +C + + C+ GL F P RC AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 464 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 383 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 562
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 563 PSC 571
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 461 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 678 YFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRV-QCNAT 794
++ +C + + C+ GL F P RC AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 464 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 37.1 bits (82), Expect = 0.017
Identities = 28/107 (26%), Positives = 36/107 (33%), Gaps = 1/107 (0%)
Frame = +2
Query: 254 CRDXQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGSIQPAQTTPDCP-HQYGIFK 430
C D Q M CP+ L F+ E +P PA + C G+
Sbjct: 974 CIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFCTIRSNGLHH 1033
Query: 431 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
SP Y C GRAF C L +N D C++ C
Sbjct: 1034 LKMCSP----HYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 473 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
C G+ CP L FNP CD++ V C
Sbjct: 594 CANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 470 TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 556
TC GRAF CP L FN CD+A+
Sbjct: 452 TCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 455 CGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEK 583
C Q Y C+ GR+ C PGL +N C + V +C K
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCKIGK 945
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 660 YEGNCY-YFFSCEQNRARLLSCDIGLAFDPTTGRCV-DADRVQCN 788
Y C Y+FSC + R +SC L F + +CV D +C+
Sbjct: 963 YSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECS 1007
Score = 29.5 bits (63), Expect = 3.4
Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 3/164 (1%)
Frame = +2
Query: 152 PCPINTRCCXCPARXLQSPQWFYKTXAXCXTXIECRDXQATNMICPDGLHFNPSVEWPAY 331
P P++T P Y ++C ++ C GL +N AY
Sbjct: 875 PGPVDTTPLAKAFSCSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAY 934
Query: 332 PCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYR-TCVGGRAFDMVCP 508
+ V+ +G+GS D +G K C Y +C+ + M CP
Sbjct: 935 K--HTVDTCKIGKGS-----DIIDSNACFG--KSDGYYSAGCSSYYFSCIDEQIRKMSCP 985
Query: 509 PGLAFNPDFSRCDWADLVPSCDAEKFLGFTCP--PGSFGCYRQS 634
L F+ + +C + C L T P P F R +
Sbjct: 986 NSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFCTIRSN 1029
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 398 PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 547
P CP G++ +S +Y CV ++ CP GL F+ +RC+
Sbjct: 41 PPCPDGDGLYAVGCSS-----KYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 681 FFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCN 788
FF+C RA C L F+ TG C A+ + N
Sbjct: 450 FFTCHDGRAFANDCPGDLVFNKATGTCDFAENCEKN 485
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 461 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 571
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +2
Query: 344 PVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 511
P VTC SI P T CP Y + N P +C G A D +CPP
Sbjct: 1108 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 1167
Query: 512 G 514
G
Sbjct: 1168 G 1168
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +2
Query: 344 PVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 511
P VTC SI P T CP Y + N P +C G A D +CPP
Sbjct: 450 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 509
Query: 512 G 514
G
Sbjct: 510 G 510
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +2
Query: 344 PVEVTCVGRGSIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 511
P VTC SI P T CP Y + N P +C G A D +CPP
Sbjct: 450 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 509
Query: 512 G 514
G
Sbjct: 510 G 510
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Frame = +2
Query: 329 YPCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVGGRAF 493
Y ++ C G+ P Q DC P +YG F PN C Q +C G
Sbjct: 1463 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1522
Query: 494 D-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 580
D +CP G + +C P+C +
Sbjct: 1523 DGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GRAFDMVCPPGLAFNPDFS-RCDWADLVPSCDAEKFLGFTCPPGSFGCYRQSSE*CD 649
G+ D C PG F D S +CD AD + CD CPPG G + E CD
Sbjct: 926 GKKCDKACAPG-TFGKDCSKKCDCADGM-HCDPSDG-ECICPPGKKG--HKCDETCD 977
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Frame = +2
Query: 329 YPCGYPVEVTCVGRGSIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVGGRAF 493
Y ++ C G+ P Q DC P +YG F PN C Q +C G
Sbjct: 1463 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1522
Query: 494 D-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 580
D +CP G + +C P+C +
Sbjct: 1523 DGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GRAFDMVCPPGLAFNPDFS-RCDWADLVPSCDAEKFLGFTCPPGSFGCYRQSSE*CD 649
G+ D C PG F D S +CD AD + CD CPPG G + E CD
Sbjct: 926 GKKCDKACAPG-TFGKDCSKKCDCADGM-HCDPSDG-ECICPPGKKG--HKCDETCD 977
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 123 RTLSCGTGYAMDSETERCRDVD--ECN 147
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 708 RLLSCDIGLAFDPTTGRCVDADRVQCN 788
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 681 FFSCEQNRARLLSCDIGLAFDPTTGRC 761
F+ CE R +++C I +D TTG C
Sbjct: 35 FWKCEGGRWIVVTCQINYFYDATTGFC 61
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 7.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 633 PLNNVINYKYEGNCYY 680
P+ N ++Y GNCYY
Sbjct: 163 PITNTCTFQYNGNCYY 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,481,938
Number of Sequences: 27780
Number of extensions: 426334
Number of successful extensions: 1225
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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