SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_O21
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC082252-1|AAH82252.1|  311|Homo sapiens meteorin, glial cell di...    42   0.003
BC126313-1|AAI26314.1| 1044|Homo sapiens MEGF11 protein protein.       32   3.2  
BC117419-1|AAI17420.1| 1044|Homo sapiens MEGF11 protein protein.       32   3.2  
AL834326-1|CAD38994.1|  626|Homo sapiens hypothetical protein pr...    32   3.2  
AB300051-1|BAF64841.1| 1044|Homo sapiens MEGF11 protein.               32   3.2  
AB058677-1|BAB47410.1|  969|Homo sapiens MEGF11 protein (KIAA178...    32   3.2  
BC050568-1|AAH50568.1|  262|Homo sapiens METRNL protein protein.       31   7.3  
AF050081-1|AAC69521.1|  125|Homo sapiens C16orf3 large protein p...    30   9.7  

>BC082252-1|AAH82252.1|  311|Homo sapiens meteorin, glial cell
           differentiation regulator-like protein.
          Length = 311

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 262 GLSCSAGAGVIGDQCDWIGSGLTSNAER-GVTPVYLRLP*GQRVLDVPSGCLASVVPPST 438
           GL   AGA    D+C W GSGLT  A R  V  VYLR   G      P+G L   + P+T
Sbjct: 38  GLLGGAGAQYSSDRCSWKGSGLTHEAHRKEVEQVYLRCAAGAVEWMYPTGALIVNLRPNT 97

Query: 439 TS 444
            S
Sbjct: 98  FS 99



 Score = 30.7 bits (66), Expect = 7.3
 Identities = 26/112 (23%), Positives = 37/112 (33%)
 Frame = +2

Query: 371 CREGSVSWMYXXXXXXXXXXXXXXADERDFRVCIRVVRRPDPPDLFHTLQLNETEAADRF 550
           C  G+V WMY              +  R   VCIR                      D  
Sbjct: 75  CAAGAVEWMYPTGALIVNLRPNTFSPARHLTVCIR-------------------SFTDSS 115

Query: 551 PARLFVEGAKRLEPLYAPNDGDPRELRCFRSRKGGPLCTLRRNPXMGQETSG 706
            A +++E    L  L    DG P  ++CF   +GG          +G+ T+G
Sbjct: 116 GANIYLEKTGELRLLVPDGDGRPGRVQCFGLEQGGLFVEATPQQDIGRRTTG 167


>BC126313-1|AAI26314.1| 1044|Homo sapiens MEGF11 protein protein.
          Length = 1044

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 345 RCNTRVPPFAVRAACPGCTLGVPCVCCSALHYQPTNGTSECAYGSYG 485
           RC  R+ P  +    PGCTL  PC   + +   P  G   C  G  G
Sbjct: 343 RCQERLCPEGLHG--PGCTLPCPCDADNTISCHPVTGACTCQPGWSG 387


>BC117419-1|AAI17420.1| 1044|Homo sapiens MEGF11 protein protein.
          Length = 1044

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 345 RCNTRVPPFAVRAACPGCTLGVPCVCCSALHYQPTNGTSECAYGSYG 485
           RC  R+ P  +    PGCTL  PC   + +   P  G   C  G  G
Sbjct: 343 RCQERLCPEGLHG--PGCTLPCPCDADNTISCHPVTGACTCQPGWSG 387


>AL834326-1|CAD38994.1|  626|Homo sapiens hypothetical protein
           protein.
          Length = 626

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 345 RCNTRVPPFAVRAACPGCTLGVPCVCCSALHYQPTNGTSECAYGSYG 485
           RC  R+ P  +    PGCTL  PC   + +   P  G   C  G  G
Sbjct: 94  RCQERLCPEGLHG--PGCTLPCPCDADNTISCHPVTGACTCQPGWSG 138


>AB300051-1|BAF64841.1| 1044|Homo sapiens MEGF11 protein.
          Length = 1044

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 345 RCNTRVPPFAVRAACPGCTLGVPCVCCSALHYQPTNGTSECAYGSYG 485
           RC  R+ P  +    PGCTL  PC   + +   P  G   C  G  G
Sbjct: 343 RCQERLCPEGLHG--PGCTLPCPCDADNTISCHPVTGACTCQPGWSG 387


>AB058677-1|BAB47410.1|  969|Homo sapiens MEGF11 protein (KIAA1781)
           protein.
          Length = 969

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 345 RCNTRVPPFAVRAACPGCTLGVPCVCCSALHYQPTNGTSECAYGSYG 485
           RC  R+ P  +    PGCTL  PC   + +   P  G   C  G  G
Sbjct: 268 RCQERLCPEGLHG--PGCTLPCPCDADNTISCHPVTGACTCQPGWSG 312


>BC050568-1|AAH50568.1|  262|Homo sapiens METRNL protein protein.
          Length = 262

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 26/112 (23%), Positives = 37/112 (33%)
 Frame = +2

Query: 371 CREGSVSWMYXXXXXXXXXXXXXXADERDFRVCIRVVRRPDPPDLFHTLQLNETEAADRF 550
           C  G+V WMY              +  R   VCIR                      D  
Sbjct: 26  CAAGAVEWMYPTGALIVNLRPNTFSPARHLTVCIR-------------------SFTDSS 66

Query: 551 PARLFVEGAKRLEPLYAPNDGDPRELRCFRSRKGGPLCTLRRNPXMGQETSG 706
            A +++E    L  L    DG P  ++CF   +GG          +G+ T+G
Sbjct: 67  GANIYLEKTGELRLLVPDGDGRPGRVQCFGLEQGGLFVEATPQQDIGRRTTG 118


>AF050081-1|AAC69521.1|  125|Homo sapiens C16orf3 large protein
           protein.
          Length = 125

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +3

Query: 330 VERRARCNTRVPPFAVRAACP-GCTLGVPCVC 422
           V +RA C+ R  P A    CP  C +G P  C
Sbjct: 31  VAQRAMCSARACPVACPVGCPAACPVGCPIAC 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,728,210
Number of Sequences: 237096
Number of extensions: 2825089
Number of successful extensions: 6686
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6676
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -