Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_O08
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024089-4|AAK09073.2|  239|Caenorhabditis elegans Hypothetical ...    78   1e-14
AF045642-3|AAC02581.1|  588|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z54236-5|CAA90980.1|  386|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AC024089-4|AAK09073.2|  239|Caenorhabditis elegans Hypothetical
           protein C36E6.2 protein.
          Length = 239

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
 Frame = +3

Query: 252 IDQNLLLQFSCMNTTDREELIKQMQKLLGPSL-NYNTASFFLDMSNWNLQAAICCYLDYT 428
           ++ +L+ + S M T DRE LI + ++++ P +  ++ A+F+LD++NWNL  AI  + D  
Sbjct: 4   LENSLISKMSQMTTDDRENLIHKFEEIISPQMIPHDLAAFYLDLANWNLSTAISVFYDQN 63

Query: 429 SPKLP----------SMSVKA---SEGPTGSL--EPGARFDQNWSIVNTGTEQWPGCCRL 563
              L           S +VK     E  +GS    P + F   W +VN G  +WP   RL
Sbjct: 64  GDLLHMEEAFRQTCLSSTVKECTNREAISGSFTYRPNSTFFCGWRVVNDGRFRWPDGTRL 123

Query: 564 IQAGGEPLGATPVYLPPLSCWTFHNSYIKISSPFNFWNHKSFFHLVTDKGEQIGDTLWVE 743
               G+P+         L      N  I+IS P    + K+ F  VT +    G+++WV 
Sbjct: 124 AFVDGDPIDYEVWKDTVLDPDQSENIEIRISCPAEMGDFKARFQFVTPQNFFFGESIWVI 183

Query: 744 VTV 752
           + V
Sbjct: 184 IRV 186


>AF045642-3|AAC02581.1|  588|Caenorhabditis elegans Hypothetical
           protein C17H12.2 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = +3

Query: 513 WSIVNTG--TEQWPGCCRLIQAGGEPLGATPVYLPPLSCWTFHNSYIKISSPFNFWNHKS 686
           + +VNT   T Q  GC  L+  G   +GA+  ++  L+  ++H+S+++++   +  + + 
Sbjct: 368 FELVNTWMLTFQKRGCNNLLSTGA--IGASQAFVQSLTASSYHDSHLEVALDAHDLHREM 425

Query: 687 FFH-LVTDKGEQIGDTLWVEVTVESE 761
            FH +       +  T+ V++ +++E
Sbjct: 426 NFHGIPVYSNMGVVGTIRVDIKLDTE 451


>Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical
           protein F08A10.2 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = +1

Query: 157 ITNS*LFISYLFIYIKRRELKWTLMAPQYLEKLIKIYYYNLVV*IQQTEKNLLNKC 324
           I NS LF+  L+ +I      W  +A    +KLIKI Y   ++ +Q   K L N C
Sbjct: 111 IQNSLLFLLALYRFIIVFFPSWKSVASTNFKKLIKILYIFFIL-VQIIHKLLQNIC 165


>Z54236-5|CAA90980.1|  386|Caenorhabditis elegans Hypothetical
           protein C27B7.5 protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 625 QQERGGK*TGVAPRGSPPACINLQQPGHCS 536
           ++ R G+ TG   RG P  C + Q+ GH S
Sbjct: 151 KRPRSGRRTGRRGRGGPGHCFHCQEHGHIS 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,546
Number of Sequences: 27780
Number of extensions: 378287
Number of successful extensions: 815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)