Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_O07
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0946 + 9393206-9393547,9394495-9395078,9395410-9395890           31   0.92 
03_01_0121 + 940338-940637,941023-941324,941417-941969,943889-94...    28   8.6  

>08_01_0946 + 9393206-9393547,9394495-9395078,9395410-9395890
          Length = 468

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 871 VLXVTYTCFRYVKGDVAIHTCLAFVFLCWSYLDSFVITT 755
           VL V Y C  Y  G    + C A V LC+    S +I T
Sbjct: 326 VLVVAYLCLAYTLGPAVAYACTATVGLCYGVQFSVMIPT 364


>03_01_0121 +
           940338-940637,941023-941324,941417-941969,943889-944848
          Length = 704

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 457 IVGKLFHVLAGKRHGELYAIQDS 525
           +VG+ FH  AG+ H E++A++D+
Sbjct: 85  VVGEGFHPKAGQPHAEVFALRDA 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,544,257
Number of Sequences: 37544
Number of extensions: 356190
Number of successful extensions: 597
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)