Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_O07
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024503-8|AAG24090.2|  283|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z82282-3|CAB05275.1|  638|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AF024503-8|AAG24090.2|  283|Caenorhabditis elegans Hypothetical
           protein F31F4.11 protein.
          Length = 283

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -1

Query: 850 CFRYVKGDVAIHTCLAFVFLCWSYLDSFVITTP 752
           C+ ++K  +A  TC+  +F CW++  + ++  P
Sbjct: 8   CWTFIKFLIAWATCVVIIFCCWTHKKTDLLAIP 40


>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 380 NVIIMYTYIIS*KINNEHIYLFVYITYVNS*PIFFIPL 267
           N I    Y+ S ++NN +IY+F  IT V    + +IPL
Sbjct: 201 NKIRKLAYLESTQLNNLYIYIFWLITTVVMFKVIYIPL 238


>Z82282-3|CAB05275.1|  638|Caenorhabditis elegans Hypothetical
           protein T07G12.3 protein.
          Length = 638

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = -1

Query: 808 LAFVFLCWSYLDSFVITTPIFKWLDILTTRWQSYNNTTHLIFSRLFNFLDNSES 647
           L+ VFL W+      I T +  +L      W+S+NN +  I S+ F +LD+S S
Sbjct: 8   LSVVFL-WAMKFIKYIITILLAFLGFYMLSWRSFNNGSTKIESK-FLYLDSSRS 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,088,181
Number of Sequences: 27780
Number of extensions: 363451
Number of successful extensions: 613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)