Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_O02
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    25   1.2  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    25   1.2  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    24   2.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   3.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.4  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.5  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 108 ISNVSNLQNHHNDNASL-VNAGQILRIP 28
           ISN+SN  N++N N  L  N   I +IP
Sbjct: 90  ISNISNYNNNNNYNKKLYYNINYIEQIP 117


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 108 ISNVSNLQNHHNDNASL-VNAGQILRIP 28
           ISN+SN  N++N N  L  N   I +IP
Sbjct: 328 ISNISNYNNNNNYNKKLYYNINYIEQIP 355


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 108 ISNVSNLQNHHNDNASL-VNAGQILRIP 28
           ISN+SN  N +N N  L  N   I +IP
Sbjct: 90  ISNISNYNNDNNYNKKLYYNINYIEQIP 117


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 38  KICPALTRDALSLWWFCKLLTLLIPAKCLYHEY 136
           KIC  +T  A+ +  F   +   +P K L +EY
Sbjct: 492 KICWTITTPAICVGVFTFNIIKFVPVKYLTYEY 524


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 38  KICPALTRDALSLWWFCKLLTLLIPAKCLYHEY 136
           KIC  +T  A+ +  F   +   +P K L +EY
Sbjct: 545 KICWTITTPAICVGVFTFNIIKFVPVKYLTYEY 577


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 250 GFGYKGSIFHRVIPN 294
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 250 GFGYKGSIFHRVIPN 294
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 250 GFGYKGSIFHRVIPN 294
           GFGY+ ++ ++V+P+
Sbjct: 15  GFGYESNVKYQVVPS 29


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 578 LEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQ 477
           L V+P++   V +C   S   ++  KT C   +Q
Sbjct: 643 LNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQ 676


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,048
Number of Sequences: 438
Number of extensions: 5226
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)