Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N24
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150...    31   1.6  
08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054     30   2.9  
08_02_0265 - 15012662-15013918                                         28   8.7  

>09_02_0504 -
           10013784-10014041,10014558-10014660,10014932-10015093,
           10015416-10015549,10015633-10015716,10015839-10016129,
           10016362-10016694,10016823-10016965,10017273-10017429,
           10017513-10017616,10017728-10017888,10017971-10018287,
           10018396-10018677,10018759-10019226,10019338-10019391,
           10019689-10019742,10019943-10020021,10020108-10020196,
           10021153-10021273,10022321-10022637
          Length = 1236

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -2

Query: 182 RYEVVNFFAPEHVERRDIPTRSKGTIISLTFLTRAHAMTPRKLTQKI 42
           RYE +N  A  +V RR +PT      I +  LT A  +T +K+T KI
Sbjct: 117 RYENLNIEAESYVGRRGLPTILNTYTIIMEGLTNALCIT-KKITHKI 162


>08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054
          Length = 995

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 887 KNVTNXLHLNGEGGAK*IDIKQLFCYLTKMIYSKLFK 777
           +N+ N +HL+  G ++  D KQ+F  LTK+ Y  L K
Sbjct: 609 RNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSK 645


>08_02_0265 - 15012662-15013918
          Length = 418

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 580 QLHSTHSHHIIRKIPLELDTSLTANDAHRLDASEGYHE 467
           ++  T +   + ++ LE D  L   D HR     GYHE
Sbjct: 232 EMDLTRTSRFVARVLLECDGRLLMADRHRHGGDAGYHE 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,968,124
Number of Sequences: 37544
Number of extensions: 370887
Number of successful extensions: 980
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)