Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_N23
(888 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 359 e-100
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 3e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 3e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 6e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 6e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 1e-19
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 4e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 9e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 3e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.2
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 3.6
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 27 4.7
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 4.7
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 26 6.2
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 359 bits (884), Expect = e-100
Identities = 176/187 (94%), Positives = 183/187 (97%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 429
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDT
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 98
Query: 430 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 609
I+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 99 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 158
Query: 610 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYNIXKXST 789
TLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYNI K ST
Sbjct: 159 TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 218
Query: 790 LHXVLRL 810
LH VLRL
Sbjct: 219 LHLVLRL 225
Score = 359 bits (884), Expect = e-100
Identities = 176/187 (94%), Positives = 183/187 (97%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 429
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDT
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 174
Query: 430 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 609
I+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 175 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 234
Query: 610 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYNIXKXST 789
TLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYNI K ST
Sbjct: 235 TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 294
Query: 790 LHXVLRL 810
LH VLRL
Sbjct: 295 LHLVLRL 301
Score = 359 bits (884), Expect = e-100
Identities = 176/187 (94%), Positives = 183/187 (97%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 429
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDT
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 250
Query: 430 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 609
I+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK
Sbjct: 251 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 310
Query: 610 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYNIXKXST 789
TLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYNI K ST
Sbjct: 311 TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 370
Query: 790 LHXVLRL 810
LH VLRL
Sbjct: 371 LHLVLRL 377
Score = 285 bits (698), Expect = 8e-78
Identities = 139/149 (93%), Positives = 145/149 (97%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 544 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 723
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 724 FAGKQLEDGRXLSDYNIXKXSTLHXVLRL 810
FAGKQLEDGR LSDYNI K STLH VLRL
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Score = 228 bits (557), Expect = 9e-61
Identities = 110/115 (95%), Positives = 115/115 (100%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDT 429
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDT
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 326
Query: 430 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 594
I+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 327 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 115
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 191
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 267
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 343
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 815 GGMXIFVKTLTG 850
GGM IFVKTLTG
Sbjct: 75 GGMQIFVKTLTG 86
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 815 GGMXIFVKTLTG 850
GGM IFVKTLTG
Sbjct: 151 GGMQIFVKTLTG 162
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 815 GGMXIFVKTLTG 850
GGM IFVKTLTG
Sbjct: 227 GGMQIFVKTLTG 238
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 815 GGMXIFVKTLTG 850
GGM IFVKTLTG
Sbjct: 303 GGMQIFVKTLTG 314
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 544 IQKESTLHLVLRLRGG-MQIFVKTLTGK 624
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 136 bits (329), Expect = 4e-33
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = +1
Query: 592 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYN 771
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 772 IXKXSTLHXVLRL 810
I K STLH VLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 79.8 bits (188), Expect = 5e-16
Identities = 40/50 (80%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 396
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 544 IQKESTLHLVLRLRGG-MQIFVKTLTGK 624
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 136 bits (329), Expect = 4e-33
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = +1
Query: 592 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYN 771
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 772 IXKXSTLHXVLRL 810
I K STLH VLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 79.8 bits (188), Expect = 5e-16
Identities = 40/50 (80%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 396
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 6e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 544 IQKESTLHLVLRLRGG 591
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 136 bits (330), Expect = 3e-33
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1
Query: 592 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYN 771
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 772 IXKXSTLHXVLRLXXWNAXFCENTY 846
I K STLH VLRL + TY
Sbjct: 61 IQKESTLHLVLRLRGGGKKRKKKTY 85
Score = 79.0 bits (186), Expect = 8e-16
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 363
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 6e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 544 IQKESTLHLVLRLRGG 591
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 136 bits (330), Expect = 3e-33
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1
Query: 592 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYN 771
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 772 IXKXSTLHXVLRLXXWNAXFCENTY 846
I K STLH VLRL + TY
Sbjct: 61 IQKESTLHLVLRLRGGGKKRKKKTY 85
Score = 79.0 bits (186), Expect = 8e-16
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 363
+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 76.6 bits (180), Expect = 4e-15
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPE 251
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 39
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 544 IQKESTLHLVLRLRGG 591
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 81.8 bits (193), Expect = 1e-16
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 592 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYN 771
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 772 IXKXSTLHXVLRL 810
+ S LH VL L
Sbjct: 61 LEGGSVLHLVLAL 73
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 250 NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 363
+QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 39 SQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 48.0 bits (109), Expect = 2e-06
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = +3
Query: 135 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 248
M I VKTLTGK I L+++ +D + +K ++++KEGIPP
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPP 38
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +1
Query: 394 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 555
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 39.5 bits (88), Expect = 6e-04
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 622 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYNI 774
K + +V A I +K KIQ ++ ++Q+LI++G+ L D + + +YNI
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNI 62
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 9e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 364 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 543
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 544 IQKESTLHLVLRL 582
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 592 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYN 771
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 772 IXKXSTLHXVLRL 810
I ++H V L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 35.5 bits (78), Expect = 0.010
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 247 QNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 354
+ +QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 41 KERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 391 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 564
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 619 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDYNIXKXSTL 792
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 1.2
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = -2
Query: 698 IPSLS*IFAFTFSMVSDASTSSVMVL-PVSVFTKICMPPLRRNTKCRVDSF*ML*SDNVR 522
+PS + F+ T S + +ST S +L P SV + I P + + + S + SD
Sbjct: 114 LPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAIL--PSSTSVEVSISSSSLSSSD--- 168
Query: 521 PSSSCLPAKINRC*SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTKICIP 360
P +S + ++ S PS+S + TFS + STSS + SV + P
Sbjct: 169 PLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSP 222
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 367 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 540
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 541 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 630
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 93 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 233
+N N F ETT + L + + +++E + EN+K+ ++ K
Sbjct: 222 NNLNQIVRFIFETTADMIGIDLAKRQVPIQLERTSASENLKSNLKIK 268
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 660 NGVRCFNF*CDGFTGKCFHKDLHATS 583
+G + +N CD F GKCFHK ATS
Sbjct: 21 DGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 450 LGFHILNGVRCFNF*CDGFTGKCFHKDLHSTS 355
L +G + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 703 EEFPLCPESLLSHSQWCQMLQL 638
EEF LC ESLL+H +QL
Sbjct: 345 EEFKLCKESLLAHKNSIYDVQL 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,417,241
Number of Sequences: 5004
Number of extensions: 69269
Number of successful extensions: 255
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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