Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N21
         (1150 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D89501-1|BAA13971.1|  134|Homo sapiens PBI protein.                    34   1.1  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     33   2.6  

>D89501-1|BAA13971.1|  134|Homo sapiens PBI protein.
          Length = 134

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 19/63 (30%), Positives = 20/63 (31%)
 Frame = +1

Query: 778 PXPXPXXPXAPXXPLPXPXXXSXXXXXVPPPXGXGRXSTSSXXPPXXGXXSPXXXXPLXX 957
           P P P  P     PL  P          PPP G GR  + S  PP           P   
Sbjct: 53  PHPPPYGPGRFPPPLSPPYGPGRIPPSPPPPYGPGRIQSHSLPPPYGPGYPQPPSQPRPY 112

Query: 958 LPG 966
            PG
Sbjct: 113 PPG 115


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 19/67 (28%), Positives = 20/67 (29%)
 Frame = +1

Query: 712  PXXSLTXXRAEXXXXRSXAGXAPXPXPXXPXAPXXPLPXPXXXSXXXXXVPPPXGXGRXS 891
            P   L   RA      + A   P P P  P  P  PLP P          PPP       
Sbjct: 936  PGAGLPPPRAPALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPP 995

Query: 892  TSSXXPP 912
                 PP
Sbjct: 996  PPPPLPP 1002


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,228,949
Number of Sequences: 237096
Number of extensions: 1623204
Number of successful extensions: 3996
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3548
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 15963406700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)