Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N17
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase...    32   2.5  
BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase...    32   2.5  
AK126131-1|BAC86455.1|  145|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 159 AAGRSHPGPTRPQPTCWGGRVARRGPWHXSRCAARVPK 46
           A G + PGPT P P  W  R++R G    S  AA  P+
Sbjct: 19  APGPARPGPTLPSPRVWPPRLSRVGLQPSSPRAAAPPR 56


>BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 159 AAGRSHPGPTRPQPTCWGGRVARRGPWHXSRCAARVPK 46
           A G + PGPT P P  W  R++R G    S  AA  P+
Sbjct: 19  APGPARPGPTLPSPRVWPPRLSRVGLQPSSPRAAAPPR 56


>AK126131-1|BAC86455.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44143 fis, clone THYMU2019587. ).
          Length = 145

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = -1

Query: 171 TSLDAAGRSHPG-PTRPQ--PTCWGGRVARRGPWHXS 70
           T  DA    HP  P RP   P  WG  V    PWH S
Sbjct: 91  TGKDAVPERHPVCPARPMLAPVVWGPCVPEEQPWHLS 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,935,980
Number of Sequences: 237096
Number of extensions: 1680366
Number of successful extensions: 7755
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7753
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)