Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N14
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    31   1.2  
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    30   2.1  
04_04_0254 - 23951495-23951902,23952000-23952155,23952344-239524...    30   2.8  
09_04_0666 + 19318512-19318578,19319185-19319273,19321344-193221...    29   4.9  

>05_01_0356 +
           2785410-2785670,2785843-2785960,2786800-2786891,
           2787114-2787176,2787299-2787397,2787726-2787884,
           2788420-2788491,2788567-2788699,2788813-2788877,
           2789016-2789091,2789236-2789337,2789524-2789716,
           2790576-2790654,2792939-2793007,2793261-2793311,
           2793680-2793742,2793926-2794041,2794263-2794347,
           2794898-2794957,2795594-2795639,2796011-2796084,
           2796350-2796400,2796474-2796674,2796747-2796791,
           2797063-2797156,2797226-2797371,2797510-2797739,
           2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 294 REVSVLFVQSHELGSSRHGELVSAGT--RRHGDRSCCLASHHQRDCHAVVVDLFQ 136
           +E S++F Q+   G    G+ + A     R+ +  CC+ASH  +    + +DL Q
Sbjct: 624 KEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLDLMQ 678


>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -2

Query: 155 LWLT-SSKALGLGIIICHPGCKL 90
           LWL  +S ++G G IICH GC L
Sbjct: 336 LWLVQNSNSIGQGYIICHLGCHL 358


>04_04_0254 -
           23951495-23951902,23952000-23952155,23952344-23952485,
           23952772-23953160,23953833-23953948,23954290-23954371
          Length = 430

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = -1

Query: 222 GTRRHGDRSCCLASHHQRDCHAVVVDLFQSLG-PGYYYLPSWLQVAISLFIQHL 64
           G   HG   C L +H         +D     G  G  YL SWLQ+A+   I+ L
Sbjct: 116 GENFHGKIGCILRNHSGISLKTFKLDYSGMCGFDGTSYLDSWLQIALKPGIEEL 169


>09_04_0666 +
           19318512-19318578,19319185-19319273,19321344-19322171,
           19322264-19322419,19322507-19322881
          Length = 504

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 117 YYLPSWLQVAISLFIQHLKTTIKILRNST 31
           YYL SWLQ+A++  I+ L  T+ IL  +T
Sbjct: 131 YYLDSWLQIAVTPLIEEL--TLGILSYNT 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,287,407
Number of Sequences: 37544
Number of extensions: 266432
Number of successful extensions: 733
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)