Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N09
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.93 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.6  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   8.7  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   8.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   8.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   8.7  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 447 RVRGPVLNELLKNCRCSNS 391
           R+ G  +N+L+ N RC+NS
Sbjct: 568 RILGANVNDLIMNTRCANS 586


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 447 RVRGPVLNELLKNCRCSNS 391
           R+ G  +N L+KN RC+ S
Sbjct: 402 RILGANVNNLIKNTRCAKS 420


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 447 RVRGPVLNELLKNCRCSN 394
           ++ G  +N+L++N RC+N
Sbjct: 399 QILGANVNDLIRNSRCAN 416


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 577 EEQLSPNKRATSRHYEFNMINN 642
           +EQL+ +K  ++ H EF  +NN
Sbjct: 475 QEQLTLSKVTSNYHEEFQSLNN 496


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 775 SRPSRRY*IRSVRLCGCRSGRVRAR 701
           SR  RR  +R   LC C  GRVR R
Sbjct: 394 SRDFRRAFVRI--LCACCPGRVRRR 416


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 634 INNPPPKSSYLKACFPT 684
           I NP  K  Y+ A FP+
Sbjct: 4   ITNPKGKKRYITAAFPS 20


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 447 RVRGPVLNELLKNCRCSN 394
           R+    +NEL+ N RC N
Sbjct: 401 RIMNANVNELILNTRCEN 418


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 447 RVRGPVLNELLKNCRCSN 394
           R+    +NEL+ N RC N
Sbjct: 401 RIMNANVNELILNTRCEN 418


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 447 RVRGPVLNELLKNCRCSN 394
           R+    +NEL+ N RC N
Sbjct: 401 RIMNANVNELILNTRCEN 418


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,375
Number of Sequences: 438
Number of extensions: 5327
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)