Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_N08
(867 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052569-1|AAH52569.1| 344|Homo sapiens SMAD6 protein protein. 38 0.047
BC074819-1|AAH74819.2| 426|Homo sapiens SMAD family member 7 pr... 37 0.11
BC074818-1|AAH74818.2| 426|Homo sapiens SMAD family member 7 pr... 37 0.11
AF026559-1|AAL68977.1| 426|Homo sapiens Smad7 protein. 37 0.11
AF015261-1|AAB81354.1| 426|Homo sapiens Smad7 protein protein. 37 0.11
AF010193-1|AAB81246.1| 426|Homo sapiens MAD-related gene SMAD7 ... 37 0.11
BC012986-1|AAH12986.1| 496|Homo sapiens SMAD family member 6 pr... 36 0.25
AF043640-1|AAC00497.1| 496|Homo sapiens Smad6 protein. 36 0.25
AF041065-1|AAF14343.1| 496|Homo sapiens Smad6 protein protein. 36 0.25
AF037469-1|AAC82331.1| 496|Homo sapiens Smad6 protein. 36 0.25
AF035528-1|AAB94137.1| 496|Homo sapiens Smad6 protein. 36 0.25
U59914-1|AAC50792.1| 235|Homo sapiens Smad6 protein. 35 0.33
U44378-1|AAA91041.1| 552|Homo sapiens Dpc4 protein. 32 2.4
BC002379-1|AAH02379.1| 552|Homo sapiens SMAD family member 4 pr... 32 2.4
AF045447-1|AAC03051.1| 552|Homo sapiens deleted in pancreatic c... 32 2.4
AB043547-1|BAB40977.1| 436|Homo sapiens SMAD4 protein. 32 2.4
BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein. 31 4.1
BC000218-1|AAH00218.1| 618|Homo sapiens delta-like 3 (Drosophil... 31 7.2
AK075302-1|BAC11535.1| 587|Homo sapiens protein ( Homo sapiens ... 31 7.2
AF241373-1|AAF62542.1| 618|Homo sapiens DLL3 protein precursor ... 31 7.2
>BC052569-1|AAH52569.1| 344|Homo sapiens SMAD6 protein protein.
Length = 344
Score = 37.9 bits (84), Expect = 0.047
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS--------CCNPYHWSRLCKPG 425
F +PDL+ EL+ + C + CCNPYH+SRLC PG
Sbjct: 230 FRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGPG 273
>BC074819-1|AAH74819.2| 426|Homo sapiens SMAD family member 7
protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS-------CCNPYHWSRLCK 419
F +PDLR SE++R+ C CCNP+H SRLC+
Sbjct: 163 FRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCE 203
Score = 31.5 bits (68), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 544 LLTMKTPPPPYTRFAMDNYKP 606
L +++PPPPY+R+ MD KP
Sbjct: 201 LCELESPPPPYSRYPMDFLKP 221
>BC074818-1|AAH74818.2| 426|Homo sapiens SMAD family member 7
protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS-------CCNPYHWSRLCK 419
F +PDLR SE++R+ C CCNP+H SRLC+
Sbjct: 163 FRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCE 203
Score = 31.5 bits (68), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 544 LLTMKTPPPPYTRFAMDNYKP 606
L +++PPPPY+R+ MD KP
Sbjct: 201 LCELESPPPPYSRYPMDFLKP 221
>AF026559-1|AAL68977.1| 426|Homo sapiens Smad7 protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS-------CCNPYHWSRLCK 419
F +PDLR SE++R+ C CCNP+H SRLC+
Sbjct: 163 FRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCE 203
Score = 31.5 bits (68), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 544 LLTMKTPPPPYTRFAMDNYKP 606
L +++PPPPY+R+ MD KP
Sbjct: 201 LCELESPPPPYSRYPMDFLKP 221
>AF015261-1|AAB81354.1| 426|Homo sapiens Smad7 protein protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS-------CCNPYHWSRLCK 419
F +PDLR SE++R+ C CCNP+H SRLC+
Sbjct: 163 FRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCE 203
Score = 31.5 bits (68), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 544 LLTMKTPPPPYTRFAMDNYKP 606
L +++PPPPY+R+ MD KP
Sbjct: 201 LCELESPPPPYSRYPMDFLKP 221
>AF010193-1|AAB81246.1| 426|Homo sapiens MAD-related gene SMAD7
protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS-------CCNPYHWSRLCK 419
F +PDLR SE++R+ C CCNP+H SRLC+
Sbjct: 163 FRWPDLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCE 203
Score = 31.5 bits (68), Expect = 4.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 544 LLTMKTPPPPYTRFAMDNYKP 606
L +++PPPPY+R+ MD KP
Sbjct: 201 LCELESPPPPYSRYPMDFLKP 221
>BC012986-1|AAH12986.1| 496|Homo sapiens SMAD family member 6
protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS--------CCNPYHWSRLCKP 422
F +PDL+ EL+ + C + CCNPYH+SRLC P
Sbjct: 230 FRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGP 272
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 556 KTPPPPYTRFA-MDNYKPKDHGXSTEDARXDRPRXGLTLAP 675
++PPPPY+R + D YKP D ST L AP
Sbjct: 273 ESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF043640-1|AAC00497.1| 496|Homo sapiens Smad6 protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS--------CCNPYHWSRLCKP 422
F +PDL+ EL+ + C + CCNPYH+SRLC P
Sbjct: 230 FRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGP 272
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 556 KTPPPPYTRFA-MDNYKPKDHGXSTEDARXDRPRXGLTLAP 675
++PPPPY+R + D YKP D ST L AP
Sbjct: 273 ESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF041065-1|AAF14343.1| 496|Homo sapiens Smad6 protein protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS--------CCNPYHWSRLCKP 422
F +PDL+ EL+ + C + CCNPYH+SRLC P
Sbjct: 230 FRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGP 272
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 556 KTPPPPYTRFA-MDNYKPKDHGXSTEDARXDRPRXGLTLAP 675
++PPPPY+R + D YKP D ST L AP
Sbjct: 273 ESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF037469-1|AAC82331.1| 496|Homo sapiens Smad6 protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS--------CCNPYHWSRLCKP 422
F +PDL+ EL+ + C + CCNPYH+SRLC P
Sbjct: 230 FRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGP 272
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 556 KTPPPPYTRFA-MDNYKPKDHGXSTEDARXDRPRXGLTLAP 675
++PPPPY+R + D YKP D ST L AP
Sbjct: 273 ESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF035528-1|AAB94137.1| 496|Homo sapiens Smad6 protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +3
Query: 318 FCFPDLRDLSELRRMPHCTDNS--------CCNPYHWSRLCKP 422
F +PDL+ EL+ + C + CCNPYH+SRLC P
Sbjct: 230 FRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGP 272
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 556 KTPPPPYTRFA-MDNYKPKDHGXSTEDARXDRPRXGLTLAP 675
++PPPPY+R + D YKP D ST L AP
Sbjct: 273 ESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>U59914-1|AAC50792.1| 235|Homo sapiens Smad6 protein.
Length = 235
Score = 35.1 bits (77), Expect = 0.33
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 550 TMKTPPPPYTRFA-MDNYKPKDHGXSTEDARXDRPRXGLTLAP 675
T K+PPPPY+R + D YKP D ST L AP
Sbjct: 10 TQKSPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 52
>U44378-1|AAA91041.1| 552|Homo sapiens Dpc4 protein.
Length = 552
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = +3
Query: 324 FPDLRDLSELRRMPHCT-------DNSCCNPYHWSRLCKPGTCLS 437
+PDL +EL+ + +C D+ C NPYH+ R+ PG LS
Sbjct: 101 WPDLHK-NELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLS 144
>BC002379-1|AAH02379.1| 552|Homo sapiens SMAD family member 4
protein.
Length = 552
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = +3
Query: 324 FPDLRDLSELRRMPHCT-------DNSCCNPYHWSRLCKPGTCLS 437
+PDL +EL+ + +C D+ C NPYH+ R+ PG LS
Sbjct: 101 WPDLHK-NELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLS 144
>AF045447-1|AAC03051.1| 552|Homo sapiens deleted in pancreatic
carcinoma protein.
Length = 552
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = +3
Query: 324 FPDLRDLSELRRMPHCT-------DNSCCNPYHWSRLCKPGTCLS 437
+PDL +EL+ + +C D+ C NPYH+ R+ PG LS
Sbjct: 101 WPDLHK-NELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLS 144
>AB043547-1|BAB40977.1| 436|Homo sapiens SMAD4 protein.
Length = 436
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = +3
Query: 324 FPDLRDLSELRRMPHCT-------DNSCCNPYHWSRLCKPGTCLS 437
+PDL +EL+ + +C D+ C NPYH+ R+ PG LS
Sbjct: 101 WPDLHK-NELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLS 144
>BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein.
Length = 194
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 357 RMPHCTDNSCCNPYHW-SRLCKPGTCLS 437
R P C SCC P S LC+P +C+S
Sbjct: 142 RQPACCTTSCCRPSSSVSLLCRPASCVS 169
>BC000218-1|AAH00218.1| 618|Homo sapiens delta-like 3 (Drosophila)
protein.
Length = 618
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 211 CCEGWRGRWTRGP-AVPCAYRPR--RLMTVGCASRSPGPSASQTCATCPSC 354
C EGW G P + PR T GC PGP CA SC
Sbjct: 239 CLEGWTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSC 289
>AK075302-1|BAC11535.1| 587|Homo sapiens protein ( Homo sapiens
cDNA FLJ90821 fis, clone Y79AA1001328, highly similar to
Delta-like protein 3 precursor. ).
Length = 587
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 211 CCEGWRGRWTRGP-AVPCAYRPR--RLMTVGCASRSPGPSASQTCATCPSC 354
C EGW G P + PR T GC PGP CA SC
Sbjct: 239 CLEGWTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSC 289
>AF241373-1|AAF62542.1| 618|Homo sapiens DLL3 protein precursor
protein.
Length = 618
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 211 CCEGWRGRWTRGP-AVPCAYRPR--RLMTVGCASRSPGPSASQTCATCPSC 354
C EGW G P + PR T GC PGP CA SC
Sbjct: 239 CLEGWTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSC 289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,187,388
Number of Sequences: 237096
Number of extensions: 1927953
Number of successful extensions: 6153
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6123
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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