Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_N08
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79600-12|CAB70221.2| 415|Caenorhabditis elegans Hypothetical p... 28 7.5
Z75540-7|CAB70215.2| 415|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 28 7.5
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 28 7.5
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 28 7.5
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 28 7.5
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 28 9.9
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 9.9
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z79600-12|CAB70221.2| 415|Caenorhabditis elegans Hypothetical
protein F37D6.6 protein.
Length = 415
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 381 SCCNPYHWSRLCKPGT 428
SCCNPYH++ +P T
Sbjct: 138 SCCNPYHYALWIRPET 153
>Z75540-7|CAB70215.2| 415|Caenorhabditis elegans Hypothetical
protein F37D6.6 protein.
Length = 415
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 381 SCCNPYHWSRLCKPGT 428
SCCNPYH++ +P T
Sbjct: 138 SCCNPYHYALWIRPET 153
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 417 CRDDSSGKGCSRNCRCSEASDAARTGR 337
C G+ C +C CS+AS + +TG+
Sbjct: 590 CSKGKYGESCELSCPCSDASCSKQTGK 616
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 417 CRDDSSGKGCSRNCRCSEASDAARTGR 337
C G+ C +C CS+AS + +TG+
Sbjct: 590 CSKGKYGESCELSCPCSDASCSKQTGK 616
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 417 CRDDSSGKGCSRNCRCSEASDAARTGR 337
C G+ C +C CS+AS + +TG+
Sbjct: 590 CSKGKYGESCELSCPCSDASCSKQTGK 616
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 417 CRDDSSGKGCSRNCRCSEASDAARTGR 337
C G+ C +C CS+AS + +TG+
Sbjct: 590 CSKGKYGESCELSCPCSDASCSKQTGK 616
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 366 HCTDNSCCNPYHWSRLCKPGTCLSRRQQVHSTV*SADEI 482
HC CC H RLC P C S R + H S++E+
Sbjct: 190 HCC-RPCCPYSHHRRLCDPCYC-SNRPESHRDSSSSEEV 226
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 354 RRMPHCTDNSCCNPYHWSRLCKPGTCLSRRQQVHSTV*SADEIVFLNRFWCQC-TDIRGM 530
R++ C + C ++C TC S+ + T+ +EIV + C + + G
Sbjct: 45 RQLRRCLTSKCSGESVRFKVCAQKTCESKSRLARDTICGGEEIVSRGQCEVVCRSRLTGA 104
Query: 531 NAIVAFNDENPPAAIHS 581
N + +D P A S
Sbjct: 105 NFLWRVDDGTPCQAATS 121
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 423 RVCRDDSSGKGCSRNCRCSEASDAARTG--RAGLGSRRP 313
+VC + G GC CRC+ A +G + LG P
Sbjct: 1414 QVCPEGRFGAGCKEKCRCANGHCNASSGECKCNLGFTGP 1452
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 423 RVCRDDSSGKGCSRNCRCSEASDAARTG--RAGLGSRRP 313
+VC + G GC CRC+ A +G + LG P
Sbjct: 1414 QVCPEGRFGAGCKEKCRCANGHCNASSGECKCNLGFTGP 1452
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,943,892
Number of Sequences: 27780
Number of extensions: 283307
Number of successful extensions: 895
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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