Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N04
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016098-1|AAV36983.1| 1873|Drosophila melanogaster LD34837p pro...    34   0.22 
AE014296-2299|ABC66150.1| 1557|Drosophila melanogaster CG17689-P...    34   0.22 
AE014296-2298|AAF49803.3| 1873|Drosophila melanogaster CG17689-P...    34   0.22 

>BT016098-1|AAV36983.1| 1873|Drosophila melanogaster LD34837p
           protein.
          Length = 1873

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 642 HRLRPPXRASQKSTLXSXVAKPRQDYK--DTRRXPLESSLXALSCSDPAXLPEYLSAFLP 815
           HR RP   A  +S   +     + D+   +  R P E+ L  L C D   LPE+L   L 
Sbjct: 400 HRSRPKPLAQDESQSKTEAGHAKHDFGLVEVLRWPYENDLL-LQCIDREMLPEFLMDLLV 458

Query: 816 SGSVALSHXSXCR 854
           + +V+LS     R
Sbjct: 459 AETVSLSDGEGTR 471


>AE014296-2299|ABC66150.1| 1557|Drosophila melanogaster CG17689-PB,
           isoform B protein.
          Length = 1557

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 642 HRLRPPXRASQKSTLXSXVAKPRQDYK--DTRRXPLESSLXALSCSDPAXLPEYLSAFLP 815
           HR RP   A  +S   +     + D+   +  R P E+ L  L C D   LPE+L   L 
Sbjct: 400 HRSRPKPLAQDESQSKTEAGHAKHDFGLVEVLRWPYENDLL-LQCIDREMLPEFLMDLLV 458

Query: 816 SGSVALSHXSXCR 854
           + +V+LS     R
Sbjct: 459 AETVSLSDGEGTR 471


>AE014296-2298|AAF49803.3| 1873|Drosophila melanogaster CG17689-PA,
           isoform A protein.
          Length = 1873

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 642 HRLRPPXRASQKSTLXSXVAKPRQDYK--DTRRXPLESSLXALSCSDPAXLPEYLSAFLP 815
           HR RP   A  +S   +     + D+   +  R P E+ L  L C D   LPE+L   L 
Sbjct: 400 HRSRPKPLAQDESQSKTEAGHAKHDFGLVEVLRWPYENDLL-LQCIDREMLPEFLMDLLV 458

Query: 816 SGSVALSHXSXCR 854
           + +V+LS     R
Sbjct: 459 AETVSLSDGEGTR 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,581,059
Number of Sequences: 53049
Number of extensions: 309373
Number of successful extensions: 458
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)